Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2692 ATGGCCAGAAACTCCATCTTCTCCCGCCGCCGGAGGTCGGATCCGTTCGACGGTTTAGATCGTTTCACCACCTCTGATTCCGAGGTTCATGTTCTCGCCGTCGATGACAACCTCGTCGACCGTACAGTAATTGAACGTCTCCTCCGCCTCACTGCCTGTCGAGTTACTGCAGTGGATAGTGGAATTAGAGCTTTACAATATCTCGGATTGCAAGAGGAGACTAGTTCCCAAGTTGGTTTTGATAGCTTGAAGGTCGATATGATCATAACCGACTACTGTATGCCCGGAATGACAGGATATGAATTGCTAAAGAAAATTAAGGAATCATCAACTCTGAGAGAGATTCCGGTGGTGATTATGTCGTCGGAGAACGTGGTGGCGAGGATAGACAGGTGTTTGGAGGAAGGGGCAGAGGATTTCATAGTGAAGCCGGTGAAATTAGCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAAGACTGGAAGTGAAAGAAGTGGGATCAACAAAAGGAAGCTACGAGAGCCGTGTGATCAACCTTCGTCATCGCCGTCCATTTCATCCCCAGCATCATCGGATTCCTCTCCATCATGTCCATCATCTTCATCACCGTCAGATTCGCTTCAATCAACCCCATCATCGTCAGAGCCGTCTTCTCCGACGTCTACTCCTCAATCCGACGGCTCTAAATGA 699 48.93 MARNSIFSRRRRSDPFDGLDRFTTSDSEVHVLAVDDNLVDRTVIERLLRLTACRVTAVDSGIRALQYLGLQEETSSQVGFDSLKVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLADVKRLREYMVGDEKTGSERSGINKRKLREPCDQPSSSPSISSPASSDSSPSCPSSSSPSDSLQSTPSSSEPSSPTSTPQSDGSK 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34318970 34319952 - CaPI482276_05g026920.1 Cam05g2692 128096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2692 232 MobiDBLite consensus disorder prediction 180 232 - -
Cam05g2692 232 Pfam Response regulator receiver domain 31 150 IPR001789 GO:0000160(InterPro)
Cam05g2692 232 Gene3D - 29 187 - -
Cam05g2692 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 218 IPR045279 GO:0009736(InterPro)
Cam05g2692 232 SUPERFAMILY CheY-like 29 154 IPR011006 -
Cam05g2692 232 MobiDBLite consensus disorder prediction 161 232 - -
Cam05g2692 232 CDD REC_typeA_ARR 31 153 - -
Cam05g2692 232 MobiDBLite consensus disorder prediction 161 179 - -
Cam05g2692 232 SMART REC_2 29 154 IPR001789 GO:0000160(InterPro)
Cam05g2692 232 ProSiteProfiles Response regulatory domain profile. 30 158 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2692 Cam-Chr5:34318970 Cam05g2876 Cam-Chr5:35752053 7.00E-38 dispersed
Cam01g0759 Cam-Chr1:8435561 Cam05g2692 Cam-Chr5:34318970 4.30E-39 transposed
Cam10g1583 Cam-Chr10:29562291 Cam05g2692 Cam-Chr5:34318970 4.20E-40 transposed
Cam05g2692 Cam-Chr5:34318970 Cam06g1813 Cam-Chr6:29205961 2.60E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52044 PF00072 Response_reg 1.20E-21 CL0304 Cam TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2692 K14492 - csv:101209506 341.273