Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2715 ATGGCATCAAGATCCCCCACAAACTTTTTGGACCTGGCTTCTGGAGATTTACTGGATGTCCCTCGTACACCCAGGTCCCTGCCACGGGTAATGACTGTTCCTGGAATTATTTCTGAATTGGATGATTATGGAAGTAATGATGGAGATTCGGAGTCTTCATCTGTGTACCGTGAGAGGAAAATCATAGTTGCGAATATGTTGCCCTTGCACGCTAAAAAAGATGGGGAATCTGGCAAATGGTGCTTCAGTTTAGATGAGGATTCAATTTTATTGCAGCTAAAGAATGGGTTTTCGCCTGAGATGGAGGTTATATACATTGGTTCCCTCAAGGTTGAAATCGACGCCAGCGAACAGGAAGAGGTTGCTCAGAAGCTGTTCGACAATTTTAATTTTGTACCTACATTTCTTCCTTCTGATCTCCAAAAAAACTTTTATCTTGGGTTTTGCAAACAGCAGCTTTGGCCCTTATTCCATTACATGCTACCCATGTGCCCAGAGCACGGTGATCGCTTCGATCGGCAGCTTTGGCAAGCCTATGTTTCTGCGAATAAAATGTTTGCCGACAAGGTGATGGAAATCATCAATCCTGAGGAAGATTCTATTTGGGTTCATGATTATCATTTAATGGTTCTTCCAACGTTCCTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTTCTGCATAGCCCGTTTCCATCATCAGAAATCTATCGAACTTTACCAGTTCGGGATGAGATTCTCCGTGGCCTGTTAAACTGTGATTTACTTGGTTTTCATACGTTTGATTATGCACGTCACTTCCTCTCATGCTGCAGCAGAATGTTGGGCTTGGACTATGAATCTAAGCGGGGACATATTGGACTGGATTATTATGGTCGCACGGTATATATCAAAATTCTGCCTGTAGGAATTCACATGGGTCGGCTGGAATCAGTGATGAATCTTCCATCTACATTTGCTAAAGTCAAAGAAATTCGAGATCAGTTCATGGGGAAGAAACTAATTCTTGGTATTGATGACATGGACATTTTTAAGGGTATAAGCCTGAAGCTTCTCGCTGTGGAACAGCTTTTACGGCAACATCATGAGTTGCGGGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCAGGAAAAGATGTACATGAAGCTCAGAAGGAAACCTATTTGGCTGCTGAAAGGATCAATCAAGCTTACGGTTCAAATAACTACAAACCAGTAATTCTGATTGATCGCCCAGTTCCACGTTTTGAGAAGACTGCTTATTATGCTTTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGCATGAATTTGGTTCCATACAAGTATATTGTCTGCAGGCAAGGAACTCCTCTTATGGATGAGGCTATGGGCTTACAAATTGGTTCTCCTCGGACGAGTATGCTTGTAGTGTCTGAGTTTATTGGTTGCTCGCCCTCTTTAAGTGGAGCAATCAGGGTTAACCCTTGGGACATTGATGCTGTTGCCGATGCCTTGGAACTAGCCATAACAATGCCGGAGTCAGAGAAGCAGCTGCGGCATGAAAAACATTATCGATATGTCAGTTCCCACGATATAGGATATTGGTCTCGTAGTTTTATGCAAGATTTAGACAGAGCATGTCAAGATCACTATAGTAAACGGTGCTGGGGGATTGGCTTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACTATTGATCACATTGTCTCAGCTTATAAAAGAACTCATAGAAGAGCGATATTTTTGGATTACGATGGCACTATCATTTCACAAAGCTCTATAATTAAGACACCAAGCCCTGAAGTTATCTCTGTCTTGACTACGCTTTGCAATGACCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTCAGTGGTTTGCGTCTTGTGAGATGTTGGGGATTGCAGCAGAACATGGGTACTTCATAAGGTGGGGTGGAACTTCAGAATGGGAAACCAGTCCATTGTCTTCTGATCTGGATTGGATTAAAATTGTAGAGCCAGTGATGAGATTATATACAGAAGCAACGGATGGCTCGTGCATAGAACCCAAAGAGAGTGCTTTAGTCTGGCATCATCAAGATGCTGATTCTGACTTCGGATCCTGTCAAGCCAAGGAATTGCTGGACCATCTAGAAAATGTACTTGCCAACGAACCGGCCGTTGTTAAAAGGGGCCAACATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCGAGAATGGTAGATAGTGGAAGACCACCTGATTTCGTGATGTGCATTGGAGATGATCGATCAGATGAAGATATGTTTGAGAGCATATTAAGCACTGTCTCCAGTCCCTCACTGCCTTCCGCTCCAGAAATTTTTGCCTGTACTGTTGGGCGAAAGCCAAGCAAGGCCAAGTTTTACCTTGATGATACTTCCGACGTCGTGAAATTGCTGCAATGCCTTGCCTCTTCGTCACGTCCAAGACCTCGGCAACTACCACAGATGCGTGTTTCTTTTGAGAGTGTTTTTTGA 2583 43.55 MASRSPTNFLDLASGDLLDVPRTPRSLPRVMTVPGIISELDDYGSNDGDSESSSVYRERKIIVANMLPLHAKKDGESGKWCFSLDEDSILLQLKNGFSPEMEVIYIGSLKVEIDASEQEEVAQKLFDNFNFVPTFLPSDLQKNFYLGFCKQQLWPLFHYMLPMCPEHGDRFDRQLWQAYVSANKMFADKVMEIINPEEDSIWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTFAKVKEIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQHHELRGKIVLVQIVNPARGSGKDVHEAQKETYLAAERINQAYGSNNYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQGTPLMDEAMGLQIGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALELAITMPESEKQLRHEKHYRYVSSHDIGYWSRSFMQDLDRACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLTTLCNDPCNTVFIVSGRGRSSLGQWFASCEMLGIAAEHGYFIRWGGTSEWETSPLSSDLDWIKIVEPVMRLYTEATDGSCIEPKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDSGRPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQCLASSSRPRPRQLPQMRVSFESVF 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34495820 34498565 - CaPI482276_05g027150.1 Cam05g2715 128119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2715 860 Gene3D Glycogen Phosphorylase B; 312 528 - -
Cam05g2715 860 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Cam05g2715 860 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0005992(InterPro)
Cam05g2715 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 311 - -
Cam05g2715 860 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Cam05g2715 860 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Cam05g2715 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 548 - -
Cam05g2715 860 Gene3D - 720 848 IPR023214 -
Cam05g2715 860 Gene3D - 590 709 IPR023214 -
Cam05g2715 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 840 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Cam05g2715 860 SUPERFAMILY HAD-like 591 839 IPR036412 -
Cam05g2715 860 CDD HAD_TPP 592 833 - -
Cam05g2715 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Cam05g2715 860 NCBIfam HAD-IIB family hydrolase 592 793 IPR006379 -
Cam05g2715 860 Gene3D Glycogen Phosphorylase B; 52 311 - -
Cam05g2715 860 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cam05g2715 860 NCBIfam trehalose-phosphatase 589 839 IPR003337 GO:0005992(InterPro)
Cam05g2715 860 CDD GT20_TPS 59 543 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2715 Cam-Chr5:34495820 Cam10g0139 Cam-Chr10:3017249 0.00E+00 dispersed
Cam05g2715 Cam-Chr5:34495820 Cam06g1835 Cam-Chr6:29369044 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2715 K16055 - csv:101212688 1706.81