Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2716 ATGGATCTGGAAAGTGGAGTTGTTAGTGAAAAGAATGCGAAGAAGGATTCATGGAAGACGGTTTTGATGATGGCTTATCAGAGTCTTGGGGTTGTTTATGGGGAGTTGGGCACTTCGCCTTTATATGTCTATAAGAACACTTTTGCAGAAGAAGATATCAATCACACCAAGAGCAACGATGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTGACCATTGTTCCTTTGCTCAAGTACATATTTATCGTTCTTAAAGCTGATGATAATGGGGAGGGAGGGACATTTGCTCTGTATTCGTTACTGTGTCGACATGCCCGAGTTAGCTCATTGCCCAATACCCAGTTGGCTGATTCTGAACTTACCGAGTACAAGATGAATGTCCTTGGTCCACCATCTCAACAAAGTTTTGGATTCAAACTCAAATCAGCACTAGAAAAGCGTCGTGTTCTGCAAAAATTCTTGCTCGTTCTTGCTTTAATTGGGACTTGTATGGTGATAGGGGATGGCATCTTAACACCGGCTATTTCTGTTCTTTCGGCGGTTTCTGGCCTCGAACATACCATGGCGAAAGAGCATCACCAATATACAGTAGTCCCAATTGCATGCGTCGTACTGATATGCTTGTTTGCGCTTCAACACTACGGCACTCACAGGATCGGCTTCTTGTTTGCTCCCATAGTGATAGTTTGGCTAGTGTGTATTAGTGCCATTGGCCTGTACAATATTATTCACTGGAATCCGGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAGTTTCTTAAGAAAACACAAAAAGGAGGTTGGATGTCACTTGGTGGAATAATGTTGTGCATTACTGGTTCAGAGGCGATGTTTGCTGACCTTGGGCATTTTTCTCAGTTGTCAATTAAGATTGCTTTCACTTTTATGGTTTATCCGTCTCTCCTCCTAGCATACATGGGGCAAGCTGCCTATCTGTCCCAACATCATCCTCCAAATGATCATTCAATTGGGTTTTATGTATCTGTTCCTGATAAATTGAAGTGGCCTGTCCTTATAATTGCTGTGCTTGCTGCAGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCTCGAGTTAAAATTATTCATACGTCCTCAAAAGTTCACGGTCAGATCTATATCCCAGAGGTCAATTGGATTTTGATGCTGTTGTGCTTGGCTGTTACCTTAGGTTTCAGAGACACAAAGCGCCTGGGCCATGCTTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACCTGCTTGATGTCGCTTGTTATCGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCAATAGGCTTCATCTTCTTTTTTGGCACCATTGAATCTCTCTACTTCTCAGCTTCTCTTATAAAATTTCTTGAAGGAGCTTGGGTTCCCATCGCAATTTCTCTTGTGTTCCTGATCGTTATGTATGTCTGGCACTATGGTACTCTGAAGAAGTTTGAATTCGACATCCAAAACAAGGTTTCTATTAACTGGCTACTTAGTTTTGGTCGCAACTTAGGCATTGTAAGAGTCCGTGGGATTGGCGTCATACAAACGGAGCTTGTTTCGGGTATCCCGGGTATCTTCACCCACTTTGTCACCAATATTCCCGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAATATGTCCCAGTGCCACATGTTAGACCAGAGGAACGGTTTCTAATTGGTCGTATTGATACGAGTGAATACAGACTCTACCGGTGCATTGTGCGATATGGGTATCGAGATGTTCACAAAGACGATGTAGAGTTCGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGACTGCAGTGTCCGGTGATTCTAAACCGGACTTTGATAAAGATGGTGAAAAGATGTCAGTCGTCGGGACATCTTCTACCCATGAAGATAGGATGCAGATGGCTGAGACCGATAATGAAGAAGACTCTGAAGAACTGTACCAAGCTTCAGATACAAGGGAAATAAGGTCACCAGCTCCAGTTCAATTGAGAAAAAGAGTACGCTTCATTGTACCCGAGAGCCCGGAAATCAACACTAATGCAATGGAAGAATTACAAGAGCTAAGGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCGCACATGAAAGCAAAACAAGGATCGAGCATGCTGAAAAGGGTGTCGATCGACTTCATTTACGAGTTCTTAAGGAAGAACAGCAGAGAAGCCGACTTCCCAGTAGGTTTATCACATTCATCATCAACCCTTGAGGTGGGTATGATGTATCTTGTTTAA 2349 43.04 MDLESGVVSEKNAKKDSWKTVLMMAYQSLGVVYGELGTSPLYVYKNTFAEEDINHTKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPPSQQSFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYTVVPIACVVLICLFALQHYGTHRIGFLFAPIVIVWLVCISAIGLYNIIHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTFMVYPSLLLAYMGQAAYLSQHHPPNDHSIGFYVSVPDKLKWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTLGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISLVFLIVMYVWHYGTLKKFEFDIQNKVSINWLLSFGRNLGIVRVRGIGVIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPEERFLIGRIDTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSGTAVSGDSKPDFDKDGEKMSVVGTSSTHEDRMQMAETDNEEDSEELYQASDTREIRSPAPVQLRKRVRFIVPESPEINTNAMEELQELREAREGGVAYILGRSHMKAKQGSSMLKRVSIDFIYEFLRKNSREADFPVGLSHSSSTLEVGMMYLV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34512565 34517536 - CaPI482276_05g027160.1 Cam05g2716 128120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2716 782 Pfam K+ potassium transporter integral membrane domain 25 521 IPR053951 -
Cam05g2716 782 Pfam K+ potassium transporter C-terminal domain 534 778 IPR053952 -
Cam05g2716 782 MobiDBLite consensus disorder prediction 631 677 - -
Cam05g2716 782 NCBIfam potassium uptake protein 24 780 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cam05g2716 782 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 781 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2716 Cam-Chr5:34512565 Cam09g1936 Cam-Chr9:34047979 0.00E+00 dispersed
Cam05g2716 Cam-Chr5:34512565 Cam10g1237 Cam-Chr10:25788990 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2716 K03549 - csv:101212925 1494.56