Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2732 ATGTCTTCTTCAAACGATACTTCTTCTCCTTCGTCGGATTCTATTTCAAATTCAAGTTTGCCGCCTGAAGCTTTGGATTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTTCTCCTACTCCCTCTTCTCCTCCACCCTCACCGCAGACAGATGGTTTTTCATCGATGATATTGAATCATGATGATGGTCTTCTGCCGTCGACTCTTTCATCCGCAACTAAAGCTCAACCTATCGACGACCTAGTTTCACCATCTTCCTCACCTCCAGCTCCTCCAGATCCTGGAACTACACCGCCGGCCCCTACTGGCGACTCCGATTCAAATGCATCTGGCGACAATCCCTCGCCACCGCCTGAAGATTCTGCTTCGCCACCGCCGTCTCCTCAGCCGCGGCCTCATCCACCACCGCCTTCACCACCGCCTCCACAACAGCCGTCTATGGTTGGCGTCGTTAATCCTCCACCTACCCCTGTTCCGACTACAAAAGCATCTCCGACACCTCCAGGAAGCCCACCTTCTCCAATATCTGAGGATGAACCCTTTGTCCCGGTGGATCAGAGCGCCGTTCAGACTCCTAATACAGACAAGGAGCCTCCACCATCTGAACCAACGGATGCCCTTCCTCCATCAGAAAATCCAGTCACGATTCCTTCACCAGCTGCAAACCCGGCGACGGGGAAACGAACTCCGAGTCCACCTCAAGGAATTGCTACTCCCACATCAGAGTCTAACATTCTTTCACCTCCCACAACCACATTCACATCCACATCCACATCCACTCGCACTCCGAACAACTCACCTCATTTCGCCGACTCAACGCCAGTGAAATCACCATTAGGGCAGTCCAAGGCACCATCGTCTGGTTCAAGTAGTCAAACCGATGTTGCAGTAGGCGCTGCAGTCGCTGGAGTTTTCGTAATCGTTTTGATTGCTGTGGTTTTTATGTTCACAAGGAAGAAGAAAAGACGGAGAGAGATGTATACGGGCCCCTACATGCCTCCTAATAATTTTGGTGTGAAATCAGATGGAAATTACTATCCACATCAACATGGGGGTAACTCTGGTTCTACTGAAGGCTTCTATACTCAGGTCCCACATACTCCCGTTGGAAATAGCTTTGGGAGTCAAAGAGGAACAGGATACAGTGGCAGTGGAACAGAGTCAGGTGTGATAAACAGTGCCAAGTTCTTCTTTAGCTATGAAGAATTGATGGAGATTACGTCTGGATTTTCGCGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGTGTTTACCAGGGTTGGCTTCCAGAAGGGAAGTCGGTGGCTGTGAAGCAACTCAAGGCAGGAAGTGGACAGGGGGAGAGGGAATTCAAGGCAGAAGTTGAGATTATCAGTCGTGTTCATCATCGACATTTGGTGTCTTTAGTGGGCTATTGCGTCTCTGAGCATCATAGATTGCTCATCTATGAGTTTGTTCCTAATAAGACTCTTGAGCATCATCTCCATAGCGGTAATGGAGTGCCTGTGTTGGATTGGTCCAAAAGACTCAAAATCGCTTTAGGAGCCGCAAAGGGTTTGGCATATCTTCATGAAGATTGTCATCCCAGAATTATCCATCGAGACATCAAGTCAGCCAACATTTTGCTGGATGACGCTTTTGAGGCGCAGGTCGCAGATTTTGGACTTGCGAAACTGACAAATGATACACACACCCACGTTTCCACTCGTGTCATGGGGACATTTGGATACATGGCACCCGAGTACGCATCAAGTGGGAAATTGACAGACAGATCAGATGTATTCTCGTTTGGGGTTGTGCTTCTTGAGCTTATTACTGGTCGTAAGCCTGTTGATCCAACTCAGCCCCTGGGGGATGAGAGTTTGGTTGAATGGGCTCGTCCACACCTCCTGCACGCCCTTGAAACCGGGGAGTTTGATGGATTGATAGATCCACGCCTTGGAAAACAGTATGTGGAAAGTGAAATGTTCAGAATGATCGAAGCAGCAGCTGCCTGTGTTCGTCATTCCGCTCCCAAAAGGCCTCGCATGGTTCAGGTGGTGAGAGCACTAGACATTGAAAGTGACATATCTGACCTCTCCAATGGTGTTAAATATGGCCAAAGCACCATCTATGATTCTGGACAATACAATCAAGACATTTCTAAATTCAGAAGAATGGCACTCGGTTCAGACAGCTTCGAATACGATGTTTACAGTAGCGAATACAATTCCAGAGAAATGACTGCAAGTCGTGAATCATGGAGATTCAACACTAACTCAAGTGGTGAATCAGAAACTCAAGCTTTTAAAGGACGAACTGGGGCACAACAAAGTCACCATAGTGGTCGACAATTCTAA 2337 48.22 MSSSNDTSSPSSDSISNSSLPPEALDSSSPPPPPPPSPTPSSPPPSPQTDGFSSMILNHDDGLLPSTLSSATKAQPIDDLVSPSSSPPAPPDPGTTPPAPTGDSDSNASGDNPSPPPEDSASPPPSPQPRPHPPPPSPPPPQQPSMVGVVNPPPTPVPTTKASPTPPGSPPSPISEDEPFVPVDQSAVQTPNTDKEPPPSEPTDALPPSENPVTIPSPAANPATGKRTPSPPQGIATPTSESNILSPPTTTFTSTSTSTRTPNNSPHFADSTPVKSPLGQSKAPSSGSSSQTDVAVGAAVAGVFVIVLIAVVFMFTRKKKRRREMYTGPYMPPNNFGVKSDGNYYPHQHGGNSGSTEGFYTQVPHTPVGNSFGSQRGTGYSGSGTESGVINSAKFFFSYEELMEITSGFSRQNILGEGGFGCVYQGWLPEGKSVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCVSEHHRLLIYEFVPNKTLEHHLHSGNGVPVLDWSKRLKIALGAAKGLAYLHEDCHPRIIHRDIKSANILLDDAFEAQVADFGLAKLTNDTHTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPLGDESLVEWARPHLLHALETGEFDGLIDPRLGKQYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDIESDISDLSNGVKYGQSTIYDSGQYNQDISKFRRMALGSDSFEYDVYSSEYNSREMTASRESWRFNTNSSGESETQAFKGRTGAQQSHHSGRQF 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34626069 34629138 + CaPI482276_05g027320.1 Cam05g2732 128136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2732 778 ProSitePatterns Protein kinases ATP-binding region signature. 415 437 IPR017441 GO:0005524(InterPro)
Cam05g2732 778 CDD STKc_IRAK 415 684 - -
Cam05g2732 778 MobiDBLite consensus disorder prediction 1 24 - -
Cam05g2732 778 MobiDBLite consensus disorder prediction 99 115 - -
Cam05g2732 778 MobiDBLite consensus disorder prediction 63 82 - -
Cam05g2732 778 ProSiteProfiles Protein kinase domain profile. 409 689 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2732 778 MobiDBLite consensus disorder prediction 195 215 - -
Cam05g2732 778 Gene3D Transferase(Phosphotransferase) domain 1 485 697 - -
Cam05g2732 778 Pfam Protein tyrosine and serine/threonine kinase 412 681 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g2732 778 Gene3D Phosphorylase Kinase; domain 1 378 484 - -
Cam05g2732 778 SUPERFAMILY Protein kinase-like (PK-like) 390 683 IPR011009 -
Cam05g2732 778 MobiDBLite consensus disorder prediction 742 778 - -
Cam05g2732 778 MobiDBLite consensus disorder prediction 83 98 - -
Cam05g2732 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g2732 778 MobiDBLite consensus disorder prediction 1 291 - -
Cam05g2732 778 FunFam proline-rich receptor-like protein kinase PERK8 485 698 - -
Cam05g2732 778 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 262 719 IPR047117 -
Cam05g2732 778 MobiDBLite consensus disorder prediction 216 291 - -
Cam05g2732 778 FunFam Proline-rich receptor-like protein kinase PERK8 382 484 - -
Cam05g2732 778 MobiDBLite consensus disorder prediction 25 47 - -
Cam05g2732 778 MobiDBLite consensus disorder prediction 116 177 - -
Cam05g2732 778 SMART serkin_6 409 683 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2732 Cam-Chr5:34626069 Cam11g0309 Cam-Chr11:4618815 2.50E-132 dispersed
Cam05g2732 Cam-Chr5:34626069 Cam11g0552 Cam-Chr11:6992725 4.30E-140 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85223 PF07714 PK_Tyr_Ser-Thr 2.30E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2732 - - - 0.0