Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2747 ATGAAACCCTACAACTTCTCCTTTGCAATTCCCTTCCTTCTAATACTCTTGTTATTTCGTTTTCTAATCCAATCGGCGGCTGATCCCAGAGCTACTGAGGCGGCTCTCATATGTTCCAACAACACTGCTTCGCCGCCGGAGCGATCGACCTTTGTGTCGAATTTCTTGGACTCTATGGATGCGGTTACTCCTCTTATTGCTTCACAGCGATTTGCAGCCGTTGTGAATGGGACTGGAAATACGTCTGTTTATGCTTTTGGAGAGTGTATGAACGATCTTACTCAATCGGATTGTGATCTCTGTTTTGCCCAGATGAAAACTCAGATCCTGCGGTGTCTCCCCTTTCAGCTTGCTACTCGAGGGGGCAGACTTTTCTATGACGGGTGTTATGTTAGGTATGATTATTATAACTTCTTTAACGAATCCTTGAGTGCTGTGGATAGGACTGTATGTGGGAAATCGGATTACAGTGGGAATCGGACTATTTTTAGTGACAATGCTATGAAATTGGCGAGGAATTTGAGTGTAGTAGCGCCCAAGAACGATGGGTTTGCTGTGGGATTGGTGAATTTGAGAAATGTGTCCGTTTATGGATTGGGTCAGTGTTGGAAATTTGTGAAAGGGACTTCTTGTTCCAAGTGTTTGGTTGATGCAGCTAAGGACATTGGTTCTTGTCCTCCAAAAACTGAAGGAAGGGTGTTGAATGCTGGCTGTTACTTCAGATATTCAACTGAACGATTTTATTTCAACAGCACGGCAACCGCTACCGGAGGAAATGGAAGCCGTCGTCTGGCGGTAATTTTGGCTTCAGTATCTGCTGCTGTGGCTGCTGCATTGATTATTTCAACGGTTGTTTTCTGTGCCAGAAGGAGAGTAGTCAGGAAACGCAAAGAGAAAAAGCAACTCGGTCCTCTTGTGGCTATTGTTAACAAGTCCAAGCTTAATTTTTCATATGAGACTCTTGAGAGGGCCACAAATTACTTTGACCAATCCAATAAACTAGGACAAGGAGGTTCTGGTTCAGTTTATAAAGGAACCCTATCAGATGGCAGAGTTGTAGCAATTAAGAGGCTTTTCTTCAATACAAGACAATGGGTGGACCATTTCTTTAATGAAGTAAATCTTATTAGCGGCATCCGACACAAAAATCTTGTAGGGCTGCTGGGATGCAGCATTACAGGCCCTGAAAGCCTCCTTGTTTATGAATACGTGCCAAATCAGAGCTTGCACGATTACCTGTTTGGTAACAAGAATGTCCAGCCACTGAGTTGGGAATCCAGGTTTAAGATTGTCTTAGGCACAGCTGAAGGCTTGGCTTATCTTCATGAGGAGTCAAATGTGAAAATCATTCATCGCGACATAAAACTAAGCAATATTCTGCTGGACAATGATTTCACTCCGAAGATTGCTGATTTTGGACTTGCTAGACTGCTTCCCGAAGATAAGACACACATTAGTACCGCAATTGCTGGCACACTAGGTTACATGGCTCCTGAATATGTAGTGCGTGGCAAGTTGTCTGAAAAAGCCGATGTTTACAGTTTTGGAGTTTTTGCCATTGAAGTCATCACTGGAAGGAGGAATAATCACTTCTATCAAGATTCAACGTCCATCTTACAAAAGGTATGGAATTTGTATGGAGAGGGAAGGCTATATGCAGCTGTCGATCCTATATTAGCGGGTGATTATCCACGAGACGAAGCATCTCGGTTGCTTCAAATAGGTCTAGTTTGCGTGCAAGCCTTTGCTGATCTAAGGCCATCCATGTCGATGGTTGTGAAAATGCTTACAGCAAATTACGAGATTCCCCAGCCAAAACAGCCTCCATATCTTCATCCTTCAAGTGGAAACATAAAATCCCAAAATTCTTCAGACTCATCCAATCCCATTTTAGAGTTTGATATACATGAAGGGAAAACAAACAAAAGCTCACATTAG 1938 42.98 MKPYNFSFAIPFLLILLLFRFLIQSAADPRATEAALICSNNTASPPERSTFVSNFLDSMDAVTPLIASQRFAAVVNGTGNTSVYAFGECMNDLTQSDCDLCFAQMKTQILRCLPFQLATRGGRLFYDGCYVRYDYYNFFNESLSAVDRTVCGKSDYSGNRTIFSDNAMKLARNLSVVAPKNDGFAVGLVNLRNVSVYGLGQCWKFVKGTSCSKCLVDAAKDIGSCPPKTEGRVLNAGCYFRYSTERFYFNSTATATGGNGSRRLAVILASVSAAVAAALIISTVVFCARRRVVRKRKEKKQLGPLVAIVNKSKLNFSYETLERATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNKNVQPLSWESRFKIVLGTAEGLAYLHEESNVKIIHRDIKLSNILLDNDFTPKIADFGLARLLPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADVYSFGVFAIEVITGRRNNHFYQDSTSILQKVWNLYGEGRLYAAVDPILAGDYPRDEASRLLQIGLVCVQAFADLRPSMSMVVKMLTANYEIPQPKQPPYLHPSSGNIKSQNSSDSSNPILEFDIHEGKTNKSSH 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34734828 34739014 - CaPI482276_05g027470.1 Cam05g2747 128151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2747 645 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Cam05g2747 645 FunFam Cysteine-rich receptor-like protein kinase 2 31 138 - -
Cam05g2747 645 Gene3D Transferase(Phosphotransferase) domain 1 404 607 - -
Cam05g2747 645 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 167 626 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam05g2747 645 FunFam Cysteine-rich receptor-like protein kinase 3 147 247 - -
Cam05g2747 645 FunFam Cysteine-rich receptor-like protein kinase 2 404 604 - -
Cam05g2747 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g2747 645 SUPERFAMILY Protein kinase-like (PK-like) 314 626 IPR011009 -
Cam05g2747 645 SMART serkin_6 328 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2747 645 Pfam Protein kinase domain 329 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2747 645 CDD STKc_IRAK 334 597 - -
Cam05g2747 645 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524(InterPro)
Cam05g2747 645 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Cam05g2747 645 MobiDBLite consensus disorder prediction 606 645 - -
Cam05g2747 645 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
Cam05g2747 645 Gene3D - 144 247 IPR038408 -
Cam05g2747 645 Gene3D - 32 138 IPR038408 -
Cam05g2747 645 ProSiteProfiles Protein kinase domain profile. 328 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2747 645 MobiDBLite consensus disorder prediction 611 630 - -
Cam05g2747 645 Pfam Salt stress response/antifungal 38 135 IPR002902 -
Cam05g2747 645 Pfam Salt stress response/antifungal 151 244 IPR002902 -
Cam05g2747 645 ProSiteProfiles Gnk2-homologous domain profile. 144 247 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2747 Cam-Chr5:34734828 Cam07g0598 Cam-Chr7:10521900 1.50E-77 dispersed
Cam03g1117 Cam-Chr3:21618620 Cam05g2747 Cam-Chr5:34734828 8.10E-48 transposed
Cam06g0174 Cam-Chr6:3618588 Cam05g2747 Cam-Chr5:34734828 5.00E-12 transposed
Cam06g1535 Cam-Chr6:26811109 Cam05g2747 Cam-Chr5:34734828 5.30E-81 transposed
Cam10g1281 Cam-Chr10:26241173 Cam05g2747 Cam-Chr5:34734828 2.00E-154 transposed
Cam05g2747 Cam-Chr5:34734828 Cam08g2249 Cam-Chr8:27634786 1.50E-130 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85224 PF00069 Pkinase 2.20E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2747 - - - 0.0