Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2750 ATGGAGGTCGACGGCAGAGCTACGGCGGCGGCTCAGCCGAGGAAATTCTCTTTCCCGGTGGACTCCGAACACAAATCCACCAAATTCAACATATTCTCCGTCGCAGCGCCGCACATGCGAACGTTTCATCTCTCGTGGATTTCCTTCTGCGCTTGTTTCATTTCCAGTTTCGCGGCGGCTCCTCTGCTTCCGGTGATCCGCGACAACCTCGACTTAACCGACACCGACATTGGAAACGCCGGAATCGCCTCCGTCTCCGGCGCCGTCTTCGCCCGAATCATGATGGGTTCCGCCTGCGACTTGGTCGGACCACGTCTCGCCTCCGCTTCCCTCATTCTCATAACCTCACCGGCGGTTTATTTAACCTCCATAGCTTCATCCCCTGTTTCGTTTCTCCTTGTCCGATTCTTCACCGGCTTCTCCCTCGCTACATTCGTCTCAACCCAATTCTGGATGAGTTCCATGTTCTCCTCCAACGTCGTCGGCACCGCCAACGGTGTCGCCGGCGGCTGGGGGAACCTAGGCGGCGGCGCAACACAGTTAATCATGCCGTATGTTTTCGCCATCATCGAACACATCGGCGCAACGAAATTCACCGCGTGGAGAATCGCTTTCTTCATCCCAGCGTTATTCCAAACGCTTTCCGCCTTCGCCGTTCTCCTCCTGGGCGAGGACACTCCAGACGGGAATTTCCGGCGGCTGCAGAAAACAGGGGAGAAGGCGAAAGACGAATTATCGAAAGTTGTGTTGAATGGGGTGAAGAATTACAGGGGATGGATTCTGGCATTGACTTATGGGTATAGTTTCGGAGTGGAATTGACGATTGATAATGTAATAGCGAATTACTTTTACGATAGGTTTAATTTGAATCTGCACACGGCGGGGATAGTGGCGGCGAGTTTTGGGCTGGCGAATCTGTTTTCGAGACCTTACGGCGGAGTATTGTCGGATGTGGTGGGGAAAAGATTTGGAATGAGAGGGAGGCTGTGGGCTTTGTGGTTGGTGCAAACAATTGGGGGAATTTTGTGTGTGATTCTTGGGTTGGTTAATTCTTTGAGTGCTTCGATTGCCATTATGATCGTTTTTTCAGTGTTTGTTCAAGCTGCTTGTGGACTTACTTTTGGTGTTGTTCCTTTCGTCTCTCGAAGGTCATTAGGAGTAATATCGGGGATGACAGGTGGGGGCGGAAATGTGGGGTCGGTGCTGACTCAGCTGATATTCTTCAGAGGCAACAGATACACAAAAGAGAGAGGAATAAGTCTAATGGGAGTGATGATAATAGTTTGCACTCTCCCAATTGCATTGATTTATTTTCCTCAATGGGGCAGTATGTTCTTTGGGCCTTCCTCCAAAATTGCTTCTGAGGAAGACTATTACTTGTCGGAATGGACTTCTGAGGAGAAGGCCAAAGGCTTCCATATGGCTAGCCTTAAGTTTGCTGAGAATAGTCGAACTGAAAGAGGCAAAAACCTTAAGGGAACTGCTGATGCTGATCTTGCCTCCCCTAATGTTTAA 1515 50.17 MEVDGRATAAAQPRKFSFPVDSEHKSTKFNIFSVAAPHMRTFHLSWISFCACFISSFAAAPLLPVIRDNLDLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRLASASLILITSPAVYLTSIASSPVSFLLVRFFTGFSLATFVSTQFWMSSMFSSNVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEHIGATKFTAWRIAFFIPALFQTLSAFAVLLLGEDTPDGNFRRLQKTGEKAKDELSKVVLNGVKNYRGWILALTYGYSFGVELTIDNVIANYFYDRFNLNLHTAGIVAASFGLANLFSRPYGGVLSDVVGKRFGMRGRLWALWLVQTIGGILCVILGLVNSLSASIAIMIVFSVFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGSVLTQLIFFRGNRYTKERGISLMGVMIIVCTLPIALIYFPQWGSMFFGPSSKIASEEDYYLSEWTSEEKAKGFHMASLKFAENSRTERGKNLKGTADADLASPNV 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34753091 34755496 - CaPI482276_05g027500.1 Cam05g2750 128154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2750 504 Gene3D MFS general substrate transporter like domains 35 231 IPR036259 -
Cam05g2750 504 CDD MFS_NRT2_like 42 435 IPR044772 GO:0015112(InterPro)
Cam05g2750 504 FunFam High affinity nitrate transporter 2.5 34 230 - -
Cam05g2750 504 SUPERFAMILY MFS general substrate transporter 36 438 IPR036259 -
Cam05g2750 504 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 490 IPR044772 GO:0005886(PANTHER)|GO:0015112(PANTHER)|GO:0015112(InterPro)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Cam05g2750 504 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 441 IPR020846 GO:0022857(InterPro)
Cam05g2750 504 FunFam Nitrate transporter 2.1 242 443 - -
Cam05g2750 504 Pfam Major Facilitator Superfamily 46 402 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cam05g2750 504 Gene3D MFS general substrate transporter like domains 240 443 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0270 Cam-Chr3:3803350 Cam05g2750 Cam-Chr5:34753091 4.10E-174 dispersed
Cam03g0271 Cam-Chr3:3816984 Cam05g2750 Cam-Chr5:34753091 4.10E-174 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2750 K02575 - csv:101212365 857.825