Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2780 ATGTCTTTAAGAAATTCTCAGCTCAAGTTCAATGTCGATCGTGGTACCCATTCCTCAGACGACTATGGTGGTTACATTTCTGACTCTGTGCTAGTGACTCGAAAGCACCACAAAAACCACAGACCTCATCATGTAACATTCAGCGACGACAACAACAACATACCTGATGTTCAGGAGACTTCTAAATACCGCCGTCCTCATTTCTACACCGATGACATCAATGATGAGGCTGAGGAGTTTATTAGGCTGAAGCACAACCAGATGTCTATTGACCTCTAA 279 43.37 MSLRNSQLKFNVDRGTHSSDDYGGYISDSVLVTRKHHKNHRPHHVTFSDDNNNIPDVQETSKYRRPHFYTDDINDEAEEFIRLKHNQMSIDL 92
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35015850 35016128 + CaPI482276_05g027800.1 Cam05g2780 128184

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2780 92 MobiDBLite consensus disorder prediction 36 63 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2780 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g640 . Blo16g01174 Bda01g02207 . Bpe13g00509 . Bma14g01822 Bma15g00220 . Cmo18g00767 . Cma18g00761 . Car18g00697 Sed06g1692 Cpe09g00534 Cpe01g01570 Bhi07g01793 Tan04g0162 Cmetu10g0658 Lac13g0138 Hepe10g1590 . . Cla05g02589 Cam05g2780 Cec05g2816 Cco05g2852 Clacu05g2782 Cmu05g2630 Cre05g2746 Cone13ag1080 Cone19ag1067 Cone8ag0693 Cone12ag0678 Lsi04g00597 Csa05g02285 Chy10g00852 Cme10g00578 Blo06g00848 Blo11g01043 Bda07g01638 . . . Bma01g00035 Bma06g00598 . Cmo04g02807 . Cma04g01772 . Car04g01797 . . . . . . . . . . . . . . . . . . . Chy09g00369 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0015316 0 0 0 0 0 1 0 1 1 0 0 1 0 1 1 0 0 0 1 1 0 0 1 0 0 1 0 1 1 0 12