Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam05g2791 | ATGATGCATAGCATTTCCATCTGGGTGGTTTCTGTATTCTTGCTGTTGGTTTTGTCTTTCCTACTGCTTATTAAAACAAAGACACACAACAAGAAACTTCCTCCAGGCCCTCCAAAGCTTCCTCTGTTGGGTCACTTGCACCTTATTGGCTCCCTCCCTCATCGCTCATTGTGGAAACTTTCAAGAAAATATGGCCCCATCATGCTCCTAAGACTCGGTTCTGTTCCAACCATCGTAATTTCCTCTGCTGCTGCCGCCAGAGAGGTGTTACAAGTGCATGATCTTGTTTGTTGTAGTCGACCTCTCTTAGCCGCTAGTGCAAGATTTTCATACAACTTCTTAGACATAGGTTTATCTCCATATACTGATCATTGGAGAGAAGTTCGTAAGATTTGTGTTCTTGAGCTCTTCAACGCTCGGCGAGTGCAGTCGTTTCACTTGATCAGAGAAGAAGAAGTCAGTCTGCTGTTAAAAACAATCGCTCAAGCTTCATCTCTTGCAATTCCAGTTGATCTGAGTGAGGAATCATATACTCTCACTGCAAATATGATCACACGCATAGCTTTTGGGAAGAGGTTTGGAGGGGGTGAACTAGATAATGGAAATTTTCAGCAGCTTATCCGTAGAGCAATAGCAGCATTAGGAAGCTTCTCCATGACTGACTTCTTTCCTAGTGTGGGTTGGATTATTGATCGACTCAGTGGCGTTAACGGGAGGCTGGAGAAGAGCTTTGTTGAGCTGGATGCTTTTTTCCGACAAGTAGTCGAAGGGACTTCTCAGAATGAAGAAAATATTGTCGATGTTTTGTTGGAAATGGAGAGAGATCACTCTGAACTTGATGATGCCTTACAACTAACTAGAGATTGCATCAAGGCAATTATCATGGATATATTTATAGCTGGAGTGAACCCTGGAGCAGGCACCATTATTTGGGTAATGGCAGAGCTAGTTAAGAATCCAAAGGTAATGAAGAAGCTACAACATGAGATCAGAAGCTACATAAAAGAAGATCTGGTAAAGGAGAACGACCTTGAAAAACTTCAATATCTAAAAATGGTGGTGAAAGAGGTTCTAAGGTTACATCCGCCTGCCCCACTTCTACTCCCAAGAGAAACCATGTCTCATTTTAAGCTCAAGGGTTACGATATTGATCCCAAAACTCATCTTCATGTCAATGTATGGGCGATCGGGCGAGATCCAAATTATTGGACTTGTCCAGAAAAATTCTTACCTGAGAGATTTATGGGAAGCAATATTGATTACAAAGGGCAGAATTTCGAGTTATTACCATTTGGAGCTGGTCGAAGAATATGTCCTGGTATGAACATGGGGATTGTCACGATGGAGTTGGCTTTGGCTAATCTATTGCTACAATTTAACTGGAAATTGCCAGATGGGATGAAAGAAGAAGATATGGACATGGAAGAGGATGCTGGTCTAACCATTGCAAAGAAATCACCTCTTAAACTCATCCCAATTGCTTATAGACCTTAA | 1494 | 41.9 | MMHSISIWVVSVFLLLVLSFLLLIKTKTHNKKLPPGPPKLPLLGHLHLIGSLPHRSLWKLSRKYGPIMLLRLGSVPTIVISSAAAAREVLQVHDLVCCSRPLLAASARFSYNFLDIGLSPYTDHWREVRKICVLELFNARRVQSFHLIREEEVSLLLKTIAQASSLAIPVDLSEESYTLTANMITRIAFGKRFGGGELDNGNFQQLIRRAIAALGSFSMTDFFPSVGWIIDRLSGVNGRLEKSFVELDAFFRQVVEGTSQNEENIVDVLLEMERDHSELDDALQLTRDCIKAIIMDIFIAGVNPGAGTIIWVMAELVKNPKVMKKLQHEIRSYIKEDLVKENDLEKLQYLKMVVKEVLRLHPPAPLLLPRETMSHFKLKGYDIDPKTHLHVNVWAIGRDPNYWTCPEKFLPERFMGSNIDYKGQNFELLPFGAGRRICPGMNMGIVTMELALANLLLQFNWKLPDGMKEEDMDMEEDAGLTIAKKSPLKLIPIAYRP | 497 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35072522 | 35074348 | - | CaPI482276_05g027910.1 | Cam05g2791 | 128195 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam05g2791 | 497 | PANTHER | CYTOCHROME P450 71B11-RELATED | 9 | 493 | IPR050193 | - | |
| Cam05g2791 | 497 | Gene3D | Cytochrome P450 | 25 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | P450 superfamily signature | 352 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 392 | 416 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | PRINTS | E-class P450 group I signature | 351 | 369 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | SUPERFAMILY | Cytochrome P450 | 34 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2791 | 497 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam05g2791 | 497 | CDD | CYP71-like | 63 | 488 | - | - | |
| Cam05g2791 | 497 | FunFam | Cytochrome P450 83B1 | 21 | 491 | - | - | |
| Cam05g2791 | 497 | Pfam | Cytochrome P450 | 34 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g2791 | Cam-Chr5:35072522 | Cam05g2797 | Cam-Chr5:35127316 | 3.70E-201 | dispersed | |
| Cam05g2791 | Cam-Chr5:35072522 | Cam05g2793 | Cam-Chr5:35077019 | 1.20E-164 | proximal | |
| Cam05g2791 | Cam-Chr5:35072522 | Cam06g1893 | Cam-Chr6:29951706 | 4.90E-113 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam05g2791 | - | - | - | 0.0 |