Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam05g2796 | ATGCATATCCTTTCCATCTGGGTCCTTTCTCTTCTCCTTCTTTTGTGTTCTCTGATATTGCTTCTTAAAACAAACAAGAATGTTGAAAAACACAAGAATAATAAGCTTAAAATTGTTCCTCCTCCTACCCCTCCAAAGCTTCCTTTGTTGGGTCATTTACACCTCATTGGCTCTCATCCCCATCGCTCCTTATGGAACCTTTCAAAAACACATGGCCCCATCATGCTCCTCAAATTTGGCTCGGTCCCCACCGTCGTGATCTCTTCAGCAGCCGTCGCACAAGAGTTGTTCAAACAACACGACCTTGCTTCTTGCAGCCGCCCTCGCTTAGCCGCCACAGCAAGATATTCATACAACTACTTAGACTTGATTTTTTCCCCATATGGTATTCATTGGAGGGAGGTTCGAAAGATTTGTATTCTCGAGCTGTTTAGTGCCAAACGCGTGCAATCTTTTCAGCATATTAGAGAAGAAGAAGTGAATTTATTATTGAATTCCATCTCCCAATCCTCATCTTCTTCAACTTTAGTTGATTTGAAGGCAAAATCTTATTCTCTCACGGCTAATATATTGACCCGGATTGCTTTTGGGAAGAGCTTTAGAGGGAGTGAACTAGATAATGAGAATTTCGAAGGGGTTATACAAAGAGCAAGCGCAGCATTGGGAAGCTTCTCGGCGAGTGATTTATTTCCTAGTTTCGGGTGGATTATTGATCGGCTTAACGGTGTTCATGAGCGACTGGAAAAAAGCTTTGCGGAGTTGGATGCTTTTTTAGAACATGTAATCAAGGATCGCATTGACTTTTGGAAGGCTTCTCAAAAGGAAGAAAATTTTGTTGATGTTTTGTTGAGAATGGAGAGAGATTGCTCAACCAAATTCACCCGAGATTGCATCAAGGCACTTGTCATGGATATATTTCTAGCTGGAGTGGAAACAGGGGCAAACATGATCATTTGGGCAATGGCAGAGCTTGTTAAGAATTCAAAAGTGATGAAGAAGCTACAAGATGAGATCAGAAGTTGCATAAAAGAAGATCAAGTGAAGGAAAGTGAGTTGGAAAAACTTGGATATCTAAAAATGGTGGTAAAGGAGGTTTTAAGGCTTCATGCACCACTCCCACTTCTCCTACCAAGAGAAACAATGTCACATTTTAAGCTGAATGGTTATGATATTCAACCCAAAACTCATGTTCATGTAAATGTATGGGCAATTGGACGAGACCCAGAAACTTGGACAAACCCACAAGAATTTTGTCCAGAGAGATTTATGGAAAGCAATATTGATTACAAAGGACAAAATTTTGAGTTAATACCATTTGGAGCTGGACGAAGGATTTGTCCTGGTGTGAATATGGGGATTGCAACAGTAGAACTGGCATTGGCTAATATGTTGTTGTGCTTTGATTGGAAATTACCAAATGGAATGAAAGAAGAAGATGTAGACATGGATGAAGATTTTGGTATTACAGTTACCAAGAAATCACCTCTTCAACTTCTTCCAATTCCTTACTTCAAATCCTATTGA | 1524 | 40.09 | MHILSIWVLSLLLLLCSLILLLKTNKNVEKHKNNKLKIVPPPTPPKLPLLGHLHLIGSHPHRSLWNLSKTHGPIMLLKFGSVPTVVISSAAVAQELFKQHDLASCSRPRLAATARYSYNYLDLIFSPYGIHWREVRKICILELFSAKRVQSFQHIREEEVNLLLNSISQSSSSSTLVDLKAKSYSLTANILTRIAFGKSFRGSELDNENFEGVIQRASAALGSFSASDLFPSFGWIIDRLNGVHERLEKSFAELDAFLEHVIKDRIDFWKASQKEENFVDVLLRMERDCSTKFTRDCIKALVMDIFLAGVETGANMIIWAMAELVKNSKVMKKLQDEIRSCIKEDQVKESELEKLGYLKMVVKEVLRLHAPLPLLLPRETMSHFKLNGYDIQPKTHVHVNVWAIGRDPETWTNPQEFCPERFMESNIDYKGQNFELIPFGAGRRICPGVNMGIATVELALANMLLCFDWKLPNGMKEEDVDMDEDFGITVTKKSPLQLLPIPYFKSY | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35104019 | 35114804 | - | CaPI482276_05g027960.1 | Cam05g2796 | 128200 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam05g2796 | 507 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | E-class P450 group I signature | 68 | 87 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | E-class P450 group I signature | 186 | 204 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | E-class P450 group I signature | 297 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | E-class P450 group I signature | 317 | 343 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | FunFam | Cytochrome P450 83B1 | 26 | 499 | - | - | |
| Cam05g2796 | 507 | Gene3D | Cytochrome P450 | 25 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PANTHER | CYTOCHROME P450 71B11-RELATED | 19 | 501 | IPR050193 | - | |
| Cam05g2796 | 507 | Pfam | Cytochrome P450 | 41 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam05g2796 | 507 | SUPERFAMILY | Cytochrome P450 | 41 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | CDD | CYP71-like | 70 | 496 | - | - | |
| Cam05g2796 | 507 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2796 | 507 | PRINTS | P450 superfamily signature | 437 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g2793 | Cam-Chr5:35077019 | Cam05g2796 | Cam-Chr5:35104019 | 3.10E-167 | dispersed | |
| Cam05g2794 | Cam-Chr5:35084087 | Cam05g2796 | Cam-Chr5:35104019 | 1.40E-211 | dispersed | |
| Cam05g2796 | Cam-Chr5:35104019 | Cam05g2799 | Cam-Chr5:35137045 | 3.10E-203 | dispersed | |
| Cam11g0930 | Cam-Chr11:14600981 | Cam05g2796 | Cam-Chr5:35104019 | 8.50E-15 | dispersed | |
| Cam05g2796 | Cam-Chr5:35104019 | Cam05g2797 | Cam-Chr5:35127316 | 1.70E-206 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam05g2796 | - | - | - | 0.0 |