Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam05g2827 | ATGGACATTCCTTCTATAATCGTAAATGCTTTGTTTATTTTTGCATTCTTGATGTGGGTTTTGCTTAACTCGTGTAAACGAGAGGTAGAGAGTGATTCCCTTCAGTCGAGAGACAGAGCATTTCGAGAGTTTAAATCGGCAATCAGCATTACTATATTTTGTAATGCTGTTATTCCATTTTGGAATTCCGGGTTTGTTGCGTATCAGTACTGGAATCATGGAATCGTTTGTGGGGAATCAGCAATTTCTGCTTTAACGTGGATTTTGGCTGCTGCGATTGCTTTTTACTGGAGAAATGGAATGTATTATCAAGGCAAAAAATGGCCGTTGATTCTAATTGTTTGGTGGGTTTTCTCGTGTGTTTATGGGTTATGTTCTTCGATTATTTACCTGCTGACCCACTTGAAATCTATGGAGTTTCCTCATTTTCTTCCAAAAGCTACTATTGTAGATTTTGCTTCATTCACTTTGTCTTTGATTATCTGTTGTACGGCACTGACTGTTAACTATTCCAAGAAACATAATGATCTTGAGAAGTCATTGCTCCAAAAAGACAATGATTGTTCTTCTGAAAATGATGGTGGTTTCATCAGTCCTGGATTATGGAGTCGAATTACATTCCAATGGCTGAATCCTCTCTTCAAAAGGGGGAGGAATCAGAAACTTGAATTAGCTCATGTTCCTTGTGTACCTCAACCTGAAACAGCTGAATATGCTTCTTCATTGCTAGAAGAATCACTTCAGAGAAAGAAAGTTGAATCTTCTTCCTTGCCCAAAGCTATAGTTCTAGCGACATGGAAATTTCTGGTCTTAACTGCAATTTTTGCAGGATTCAACACATTCGCATCCTTTATGGGGCCTTTCCTAATCACCAACTTTGTGAATTATCTGTTGGGAAAAAGTGATGACTCAAGCAACCGTGATGGGTTGATTCTTGCATTCTTCTTCTTCTTTGCTAAGACATTGGAGTCTCTTACTCAAAGACAATGGTATTTTGGCACTCACCGTGTCGGTATACAGGTAAGGGCAGCTCTTACAGTGATGATCTACAAGAAATCTATATCTATTAATGCTGCTGGTCCAAGTAATGGTAAAATCATAAATCTAATAAATGTGGATGTTGAAAGAATTGGAGACTTCTCGTGGTATATTCACAAGATTTGGTTGCTTCCTGTTCAAATAGCTCTAGCCCTTATCATCCTTTACAGGAATCTTGGAGCTGCTCCTTCCATTACTGCTCTTTTAGCCACAATATTTATAATGGTGAGCAACACACCTTTGGCCAATGTTCAAGAAAGTCTACACTCAAAGATAATGGATGCAAAGGACTCCAGAATCAAATTGACATCAGAGACTCTAAAGAACATGAGAGTCTTGAAACTGCATTCTTGGGAACAGACATTTTTGAAGAAGGTCTTGAAACTTCGAGAAGTTGAAAGAAGCTGGTTGAAGAGATACCTCTATACGTGCTCCGTTATAGCATTTCTCTTTTGGGTTTCACCAACTTTAGTTTCAGTCGTTACTTTTGGCGCCTGTGTTATGATGAAAATCCCTCTAACAGCAGGCACAGTTCTATCAGCCATTGCTACTTTTCGTATCCTACAAGAGCCAATTTATAACCTACCAGAGCTAATTTCCATGATCGCTCAAACAAAAGTTTCCCTTGACCGTATACAAGAATTCATTCGAGAAGAAGACCAAAGGAAGCAGATTTATTATCCTCCTTCCAATGCATCAGACGTCGCGATTGAAATTGTGGTCGGGGAGTATTCGTGGGAAGCTAGTGATCTAAATTTTAAGAAACCAACTATAAAAGTTGCAGAGAAGATGCAAATACCAAAGGGTTACAAGGTTGCAGTCTGTGGATCAGTTGGTTCAGGAAAATCAAGCCTACTTTGTAGTATACTGGGTGAGATCCCACAGGTTTCAGGAACACAAATGAAAGTACATGGAACTAAAGCTTATGTTCCCCAAAGTGCTTGGATCCAATCAGGCACTGTAAGAGAGAATGTGCTGTTTGGGAAAGAGATTGACAAACATTTTTATGAGGATGTGTTAGAAGCCTGTGCTTTGAATCAGGATATCAAGTTGTGGCTGGATGGAGATTGTACTTTGTTGGGAGAGAGGGGGTTGAACTTAAGTGGAGGGCAAAAGCAGAGGATTCAATTGGCAAGGGCAGTCTATAGTGATGCAGATGTTTATTTCCTGGACGATCCTTTTAGTGCTGTGGACGCATGTACCGGAACACATTTGTTCAAGAGATGTCTTTTGCAACTTCTGTCTGGTAAAACTGTGGTATATGCTACTCATCACTTGGAATTCATCGAAGCTGCAGATCTTGTTCTGGTGATGAAAAATGGTCATATTGTTCAATCAGGAAAGTATGCAGAATTAATGTCAGACTCAAACGGTGAACTTTCTAGGCACATTGCAGCTCATAGAAGATCATTGAATGGAGTTAAGCCATTCAAAGAAGATAAACCCCATCATAAAAGACCATGTAAGACACATCAGATAGAAGCTCTAGATGAAAATTTTTCACTATCCCTTGGGAATGTTGGCCACTCTGTAAGAACTCAAGAAGAGGAAACTCAAACCGGTCGTGTAAAGTGGAGTGTCTACTCAACCTTCATCACATCTGCTTATAAAGGAGCTCTTGTTCCTGTAATCCTTCTATGTCAAGTATTGTTTCAAATCCTTCAGATGGGCAGTAATTACTGGATTTCTTGGGCAACAGAAGTAGAAGGCAAGGTCAGCAGAGAGCAGTTGTTAGGGATCTTCGTTTTGATGTCCGGTGGGAGCTCCATCTTTATATTAGGCCGGGCCGTTTTGATGGCAACCATTGCTATTGAGACTGGACAAAGAATGTTTCTTGGAATGGTGACATCAATATTTGCAGCACCTATTTCATTTTTTGATGCCAAACCTTCAAGCCAAATCCTTAACAGGTCTTCTACTGATCAAGGCACCTTGGATACAGATATCCCTTATAGATTAGGAGGATTGGCTTTTGCACTCATTCAGCTGTTGAGTATCATCATCCTGATGTCCAAGGTTGCATGGCAAGTTTTCCCCCTCTTCCTTGTCGTCCTTGCTATCTCTATATGGTATCAGGGATATTACATCAGTACTGCCAGAGAACTAGCTAGAATGGTCGGGATTCGGAAGGCTCCAATTCTTCATCACTTTTCTGAAACAGTCGTAGGTGCAACAATTATCCGTTGTTTCAATCAAGAGGACCGTTTCTTGACAAAAATACTGAAGCTGGTTGATGATTATTCTCGTGTGGTTTTTCATAACTCAACTTCAATGGAATGGTTGTGCCTGAGGATCAATTTTCTTTTCGATGTTGTCTTCTTTCTCGCCCTTACCATCTTAGTGACCCTTCCTAGAACGGCAATTGATCCAAGCTTAGCAGGATTAGCAGCTACATATGGTTTGAACATGAATGTGCTTCAGGCTTGGGTAATATGGAATTTATGCAATGTGGAGAATAAAATGATATCTGTTGAGAGGATTCTTCAGTTTACTAACATTGCTTCTGAGGCACCACCGGTTATCGAAGATTGTAGGCCAATGCCAGAATGGCCAAAGGAGGGAAAGATAGAACTTGAGAACCTTCATGTCCAATACCGTCCTAATCTTCCAGTGGTTCTCAAAGGGATCACTTGTACCTTCCCAAAAAAGAAGAAAATTGGAGTTGTTGGCAGGACAGGAAGTGGAAAATCCACCTTAATCCAAGCACTTTTTAGAGTGGTAGAGCCTTCTGCAGGAAGGATTCTCATTGATGGAGTTGACATTTGCAAAATTGGTCTACATGATCTGAGGTCCAAGTTGGGTATTATTCCACAAGACCCAACATTGTTCCAAGGAACCATGAGAACTAACCTAGACCCTTTGCAGCAACATACTGATCCAGAAATATGGGAGGTCCTTCACAAGTGTCGTTTTGCCGAGATCATCCGAACGGACCACGCGGTTCTTGAAGCACCAGTGGCTGAAGATGGAGAGAATTGGAGTGTGGGACAGCGGCAACTTGTTTGTCTGGCCAGAGTGCTCCTCAAAAAACGTAGGATTCTTGTGTTGGATGAGGCAACAGCTTCCATTGATACTGCAACAGAAAATATAATTCAGGAAACAATAAGAGAGGAGACTAATGGTTGTACCGTCATTACTGTGGCTCATCGAATACCAACAATTATCGATAACGATTTGGTTTTGGTTCTTGATGAAGGCAAGGTAATCGAGTACGATTCACCATCTCGATTACTCGAGAACAGTTCTTCTATGTTTTCAAAAGTTGAAACTCTTGTTTCAAGAATATTCATTTCCTTTCCAACTGATCGACGAAAAGCTCGCACTTCTCCTCACTGTTGCAGAAGAAGAAGAAGGAAGATAGATACCTGCATTACATTCCTTGAAAGTGCACTACGACTTCCACAGGTGGGTAGCAGCGAGGATGAGGTTTTTCAGTGTCTTTTGCACGATCCAGTGTGCAACAGAATACAGTTCTCCCATGAAATTGTTTACAAGTTGCTCCAACGATTCAAAGATGATTGGAAATCTGCTTTGGGTGTCTTTAGATGGGCAGAGTCACTCTCTGGATTCAAGCACACACCAGATTTATATGACATTTTAATAGATACATTAGGTAAAACAAAGCAAATGACCAAGATGAAAAGTATGCTAGAAGAAATGAAGGAAGCTCGCCTTGTGACACTTGATACTGTAGCTAAGGCTATGCGAAGGTTTGCTGGTGCTGGACTATGGAAAGATGCTGTTAGGATATTTGATGATTTGGAAACTTTTGGGTTGGAGAAGAACACTGAATCTATGAATGTGTTGCTTGATACTCTGTGCAAAGAGAAGAAGGTCGAGCAAGCTCGAAAGATATATTTGGAACTCAAATCACATATTCCCCCGAATGCCAACACATTTAACATGTTCATTCATGGTTGGTGTAAAGTTGATAGGGTTGATGAGGCACATTGGACATTACAAGAGATGAAAGGGCATGGTTATCGTCCTTGTGTTATTAGTTATTCGACAATTATTCTATTTTATTGTCATCATTATAACTTTAGTAAGGTTTATGAGTTGCTTGATGAAATGGATGCTCAAGGATGCCCAGCAAATGTCATCACTTACACCACCATCATATGCTCACTAACAAAGTCGGACGAATTCGAGGAAGCCTTGCAAATTGCTGAGAGAATGAAATCTGCTGGATGTGAACTCGATACAGTTTTTTATAATTGTTTGATCCATACATTAGGAAGAGCGGGTAAAGTACGGGAAGCTATTCATGTATTCGAAGTAGAAATGCCAAGCAAGCGTGTTTTACCAAATACATCAACCTACAATTCTATGATTTCCATGTACTGTCATCGTGCGCAAGAACAAAAGGCTATGAAACTGCTTGAGGAGATGGAGAAATCAGGGCTTTGTAAACCTGATGTCCAGACATATTACCCATTGCTTAAATCCTGTTTTAGAACTGGAAAGACAGACTATGTTCTGAGCAAGTTATTGGATGAGATGATAAATAAACATCATCTGAGCCTTGATATATCAACCTATTCCCTTCTAATTCATGGTCTTTGTAGAGCAAATAAGTGTGAGTGGGCTTACCAGTTATTTGAGAAGATGATTAGTCAAGATATAAAGCCGAGATACCTCACATGTCAACTGCTTTTGGATGAAGTTAAGCAGAAGAATATGGGTGAAGTTGCTGATAGGATTGAAGATATCATGAAGAACTTGTGA | 5766 | 40.2 | MDIPSIIVNALFIFAFLMWVLLNSCKREVESDSLQSRDRAFREFKSAISITIFCNAVIPFWNSGFVAYQYWNHGIVCGESAISALTWILAAAIAFYWRNGMYYQGKKWPLILIVWWVFSCVYGLCSSIIYLLTHLKSMEFPHFLPKATIVDFASFTLSLIICCTALTVNYSKKHNDLEKSLLQKDNDCSSENDGGFISPGLWSRITFQWLNPLFKRGRNQKLELAHVPCVPQPETAEYASSLLEESLQRKKVESSSLPKAIVLATWKFLVLTAIFAGFNTFASFMGPFLITNFVNYLLGKSDDSSNRDGLILAFFFFFAKTLESLTQRQWYFGTHRVGIQVRAALTVMIYKKSISINAAGPSNGKIINLINVDVERIGDFSWYIHKIWLLPVQIALALIILYRNLGAAPSITALLATIFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSWEQTFLKKVLKLREVERSWLKRYLYTCSVIAFLFWVSPTLVSVVTFGACVMMKIPLTAGTVLSAIATFRILQEPIYNLPELISMIAQTKVSLDRIQEFIREEDQRKQIYYPPSNASDVAIEIVVGEYSWEASDLNFKKPTIKVAEKMQIPKGYKVAVCGSVGSGKSSLLCSILGEIPQVSGTQMKVHGTKAYVPQSAWIQSGTVRENVLFGKEIDKHFYEDVLEACALNQDIKLWLDGDCTLLGERGLNLSGGQKQRIQLARAVYSDADVYFLDDPFSAVDACTGTHLFKRCLLQLLSGKTVVYATHHLEFIEAADLVLVMKNGHIVQSGKYAELMSDSNGELSRHIAAHRRSLNGVKPFKEDKPHHKRPCKTHQIEALDENFSLSLGNVGHSVRTQEEETQTGRVKWSVYSTFITSAYKGALVPVILLCQVLFQILQMGSNYWISWATEVEGKVSREQLLGIFVLMSGGSSIFILGRAVLMATIAIETGQRMFLGMVTSIFAAPISFFDAKPSSQILNRSSTDQGTLDTDIPYRLGGLAFALIQLLSIIILMSKVAWQVFPLFLVVLAISIWYQGYYISTARELARMVGIRKAPILHHFSETVVGATIIRCFNQEDRFLTKILKLVDDYSRVVFHNSTSMEWLCLRINFLFDVVFFLALTILVTLPRTAIDPSLAGLAATYGLNMNVLQAWVIWNLCNVENKMISVERILQFTNIASEAPPVIEDCRPMPEWPKEGKIELENLHVQYRPNLPVVLKGITCTFPKKKKIGVVGRTGSGKSTLIQALFRVVEPSAGRILIDGVDICKIGLHDLRSKLGIIPQDPTLFQGTMRTNLDPLQQHTDPEIWEVLHKCRFAEIIRTDHAVLEAPVAEDGENWSVGQRQLVCLARVLLKKRRILVLDEATASIDTATENIIQETIREETNGCTVITVAHRIPTIIDNDLVLVLDEGKVIEYDSPSRLLENSSSMFSKVETLVSRIFISFPTDRRKARTSPHCCRRRRRKIDTCITFLESALRLPQVGSSEDEVFQCLLHDPVCNRIQFSHEIVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQMTKMKSMLEEMKEARLVTLDTVAKAMRRFAGAGLWKDAVRIFDDLETFGLEKNTESMNVLLDTLCKEKKVEQARKIYLELKSHIPPNANTFNMFIHGWCKVDRVDEAHWTLQEMKGHGYRPCVISYSTIILFYCHHYNFSKVYELLDEMDAQGCPANVITYTTIICSLTKSDEFEEALQIAERMKSAGCELDTVFYNCLIHTLGRAGKVREAIHVFEVEMPSKRVLPNTSTYNSMISMYCHRAQEQKAMKLLEEMEKSGLCKPDVQTYYPLLKSCFRTGKTDYVLSKLLDEMINKHHLSLDISTYSLLIHGLCRANKCEWAYQLFEKMISQDIKPRYLTCQLLLDEVKQKNMGEVADRIEDIMKNL | 1921 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 35335085 | 35346367 | + | CaPI482276_05g028270.1 | Cam05g2827 | 128231 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam05g2827 | 1921 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 270 | 550 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cam05g2827 | 1921 | Gene3D | Tetratricopeptide repeat domain | 1706 | 1774 | IPR011990 | GO:0005515(InterPro) | |
| Cam05g2827 | 1921 | Gene3D | Tetratricopeptide repeat domain | 1503 | 1637 | IPR011990 | GO:0005515(InterPro) | |
| Cam05g2827 | 1921 | Gene3D | Tetratricopeptide repeat domain | 1638 | 1705 | IPR011990 | GO:0005515(InterPro) | |
| Cam05g2827 | 1921 | FunFam | ABC transporter C family member 10 | 253 | 566 | - | - | |
| Cam05g2827 | 1921 | ProSitePatterns | ABC transporters family signature. | 713 | 727 | IPR017871 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cam05g2827 | 1921 | Pfam | PPR repeat | 1543 | 1569 | IPR002885 | - | |
| Cam05g2827 | 1921 | Gene3D | - | 1186 | 1437 | IPR027417 | - | |
| Cam05g2827 | 1921 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1642 | 1676 | IPR002885 | - | |
| Cam05g2827 | 1921 | Pfam | ABC transporter | 1219 | 1367 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cam05g2827 | 1921 | CDD | ABCC_MRP_domain2 | 1200 | 1420 | - | - | |
| Cam05g2827 | 1921 | Gene3D | ABC transporter type 1, transmembrane domain | 853 | 1183 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cam05g2827 | 1921 | Gene3D | ABC transporter type 1, transmembrane domain | 245 | 568 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cam05g2827 | 1921 | CDD | ABCC_MRP_domain1 | 583 | 787 | - | - | |
| Cam05g2827 | 1921 | SUPERFAMILY | ABC transporter transmembrane region | 265 | 566 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cam05g2827 | 1921 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1856 | 1890 | IPR002885 | - | |
| Cam05g2827 | 1921 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 198 | 1432 | IPR050173 | GO:0016020(PANTHER)|GO:0042626(PANTHER)|GO:0055085(PANTHER) | |
| Cam05g2827 | 1921 | SUPERFAMILY | ABC transporter transmembrane region | 888 | 1184 | IPR036640 | GO:0005524(InterPro)|GO:0016020(InterPro) | |
| Cam05g2827 | 1921 | Gene3D | - | 578 | 823 | IPR027417 | - | |
| Cam05g2827 | 1921 | CDD | ABC_6TM_ABCC_D1 | 271 | 558 | IPR044746 | GO:0140359(InterPro) | |
| Cam05g2827 | 1921 | NCBIfam | pentatricopeptide repeat | 1645 | 1676 | IPR002885 | - | |
| Cam05g2827 | 1921 | NCBIfam | pentatricopeptide repeat | 1543 | 1571 | IPR002885 | - | |
| Cam05g2827 | 1921 | NCBIfam | pentatricopeptide repeat | 1679 | 1712 | IPR002885 | - | |
| Cam05g2827 | 1921 | NCBIfam | pentatricopeptide repeat | 1714 | 1748 | IPR002885 | - | |
| Cam05g2827 | 1921 | NCBIfam | pentatricopeptide repeat | 1750 | 1784 | IPR002885 | - | |
| Cam05g2827 | 1921 | NCBIfam | pentatricopeptide repeat | 1859 | 1890 | IPR002885 | - | |
| Cam05g2827 | 1921 | NCBIfam | pentatricopeptide repeat | 1786 | 1819 | IPR002885 | - | |
| Cam05g2827 | 1921 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 889 | 1165 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cam05g2827 | 1921 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 581 | 811 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cam05g2827 | 1921 | FunFam | ABC transporter C family member 5 | 852 | 1183 | - | - | |
| Cam05g2827 | 1921 | SMART | AAA_5 | 1228 | 1419 | IPR003593 | GO:0016887(InterPro) | |
| Cam05g2827 | 1921 | SMART | AAA_5 | 614 | 788 | IPR003593 | GO:0016887(InterPro) | |
| Cam05g2827 | 1921 | FunFam | ABC transporter C family member 3 | 1185 | 1437 | - | - | |
| Cam05g2827 | 1921 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1202 | 1436 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cam05g2827 | 1921 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1747 | 1782 | IPR002885 | - | |
| Cam05g2827 | 1921 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1193 | 1429 | IPR027417 | - | |
| Cam05g2827 | 1921 | Gene3D | Tetratricopeptide repeat domain | 1775 | 1920 | IPR011990 | GO:0005515(InterPro) | |
| Cam05g2827 | 1921 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1712 | 1746 | IPR002885 | - | |
| Cam05g2827 | 1921 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1608 | 1638 | IPR002885 | - | |
| Cam05g2827 | 1921 | Pfam | PPR repeat | 1853 | 1883 | IPR002885 | - | |
| Cam05g2827 | 1921 | Pfam | ABC transporter transmembrane region | 271 | 537 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cam05g2827 | 1921 | Pfam | ABC transporter transmembrane region | 890 | 1129 | IPR011527 | GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro) | |
| Cam05g2827 | 1921 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1783 | 1817 | IPR002885 | - | |
| Cam05g2827 | 1921 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 1677 | 1711 | IPR002885 | - | |
| Cam05g2827 | 1921 | Pfam | PPR repeat family | 1747 | 1796 | IPR002885 | - | |
| Cam05g2827 | 1921 | Pfam | PPR repeat family | 1608 | 1655 | IPR002885 | - | |
| Cam05g2827 | 1921 | Pfam | PPR repeat family | 1676 | 1724 | IPR002885 | - | |
| Cam05g2827 | 1921 | FunFam | ABC transporter C family member 5 | 570 | 821 | - | - | |
| Cam05g2827 | 1921 | Pfam | ABC transporter | 610 | 740 | IPR003439 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
| Cam05g2827 | 1921 | CDD | ABC_6TM_ABCC_D2 | 887 | 1177 | IPR044726 | GO:0140359(InterPro) | |
| Cam05g2827 | 1921 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 609 | 802 | IPR027417 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam05g2827 | - | - | - | - | 0.0 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam04g0228 | Cam-Chr4:7862851 | Cam05g2827 | Cam-Chr5:35335085 | 2.50E-16 | dispersed | |
| Cam05g2827 | Cam-Chr5:35335085 | Cam09g2138 | Cam-Chr9:35956925 | 0.00E+00 | dispersed | |
| Cam05g2827 | Cam-Chr5:35335085 | Cam10g1063 | Cam-Chr10:23366193 | 2.50E-266 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi1g1144 | . | . | . | . | . | Bpe10g00778 | . | Bma15g00243 | . | . | . | . | . | Car18g00665 | Sed06g0134 | Cpe09g00570 | . | Bhi07g01872 | Tan04g0097 | Cmetu10g0012 | Lac13g0085 | Hepe10g1542 | . | . | Cla05g02634 | Cam05g2827 | . | Cco05g2896 | Clacu05g2832 | Cmu05g2679 | Cre05g2795 | . | Cone19ag1108 | . | . | Lsi04g00655 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0006115 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 38 |