Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2829 ATGGATTCAAATTCAAAGAAATCCAACAAAATCAGAGACATCGTACGGCTTCAACAGATCCTGAAGAAATGGCGGAAGCTAGCGAACTCGTCGAAGACGGCCAACAAAATCTCCGGCACGGCGGCAGGACCTGCCGGAAAGAGCATAAAGTTTCTGAAACGGACGTTATCGTCGGCCGGTGGGGAAAGCTGCGGCGGCGCAGTACCGAAAGGCTATTTGGCGGTGAGCGTGGGGGAGGAGCAAAAGCGATTTGTGATACCGACGCAGTATTTAGGGCATCCGGCTTTTGAGATTCTGTTAAGAGAAGCGGAGGAGGAGTTCGGATTTCAACAAACGGGGGTTTTGAGGCTGCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAAAAGAAGAAAGGGGACTTGTTGTTAGGGGGAGAAGAGGTTTTGAGTTTTTGTTCATTGGAAACGCTGCAGTTAACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG 510 50.39 MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAGGESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35370430 35370939 + CaPI482276_05g028290.1 Cam05g2829 128233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2829 169 Pfam Auxin responsive protein 16 130 IPR003676 GO:0009733(InterPro)
Cam05g2829 169 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 130 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1926 Cam-Chr2:32350887 Cam05g2829 Cam-Chr5:35370430 8.60E-15 dispersed
Cam05g2829 Cam-Chr5:35370430 Cam11g0002 Cam-Chr11:1515069 9.10E-19 dispersed
Cam05g2829 Cam-Chr5:35370430 Cam04g1037 Cam-Chr4:24518720 8.80E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2829 K14488 - csv:101216710 273.092