Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam05g2829 | ATGGATTCAAATTCAAAGAAATCCAACAAAATCAGAGACATCGTACGGCTTCAACAGATCCTGAAGAAATGGCGGAAGCTAGCGAACTCGTCGAAGACGGCCAACAAAATCTCCGGCACGGCGGCAGGACCTGCCGGAAAGAGCATAAAGTTTCTGAAACGGACGTTATCGTCGGCCGGTGGGGAAAGCTGCGGCGGCGCAGTACCGAAAGGCTATTTGGCGGTGAGCGTGGGGGAGGAGCAAAAGCGATTTGTGATACCGACGCAGTATTTAGGGCATCCGGCTTTTGAGATTCTGTTAAGAGAAGCGGAGGAGGAGTTCGGATTTCAACAAACGGGGGTTTTGAGGCTGCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAAAAGAAGAAAGGGGACTTGTTGTTAGGGGGAGAAGAGGTTTTGAGTTTTTGTTCATTGGAAACGCTGCAGTTAACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG | 510 | 50.39 | MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAGGESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR | 169 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 35370430 | 35370939 | + | CaPI482276_05g028290.1 | Cam05g2829 | 128233 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam05g2829 | 169 | Pfam | Auxin responsive protein | 16 | 130 | IPR003676 | GO:0009733(InterPro) | |
Cam05g2829 | 169 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 17 | 130 | IPR003676 | GO:0009733(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1926 | Cam-Chr2:32350887 | Cam05g2829 | Cam-Chr5:35370430 | 8.60E-15 | dispersed | |
Cam05g2829 | Cam-Chr5:35370430 | Cam11g0002 | Cam-Chr11:1515069 | 9.10E-19 | dispersed | |
Cam05g2829 | Cam-Chr5:35370430 | Cam04g1037 | Cam-Chr4:24518720 | 8.80E-14 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam05g2829 | K14488 | - | csv:101216710 | 273.092 |