Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2835 ATGTGGTTACCAAGATACAGCTTAGAAAGAAAAGAGAGATTGAATGTGAATGGATTTGTGGCAGTGGCAATTGATAAAGACAAAGGAAGCCAAGGAGCTCTCAAATGGGCGATTGATCATTTGCTTCAAAGAGGACACACTATTTTCCTCATCCATGTCAAACTCAGATCTCCTTCTAATTCTTCCCAAAAGATGAGTTTGAAATCTGACTCTGAATCCAGTGTCAAAGAATTATTCCTTCCTTTTCGTTGCTTTTGTACTCGTAAGGATATACAATGCAAAGATGTTGTGTTGGAAGATACAGATGTAGCAAAGGCCATAATTGAGTATGCTGCAAATACAGCCATAGAGAACATTGTCGTGGGTGCTTCAGCAAAATCTGGCTTCTTAAGATTCAAGGCAACTGATGTTCCTGGCAGTGTAGTGAAAGGAGCACCAGATTTTTGTAATGTGTTTGTCATTTCTAAAGGAAAAATCCAATCGATGCGTTCGGCATCTCGTCCTGCTCCACCGGTAACTGCTCTACGAGGTCAATTAGCGCAACAGTCCAGCGCAAAATCCGATATGCCTGACTTCCCTGTCTCTCACTCTGCAAGTGCAAGAGCGTCTTTGGATAAGCCACCACTTGATCTGCCTAGTAAATCACAAGACGAGGCCGATTTCATGAGGTCCCCATTCACAAGGAAAGGATATAACTACAAAGCATCATATGGAGATTTGTCTATGCAAGATTCAGATATATCTTACGTTAGCTCGGGAAGACCGAGCATCGATCGTATATTTCCTTCACTTTATGACAGTCAAGATATGGGAGGAAGAGCCACACCACCACAGATTTCAAGCAGTACAGATCTTGACTTGACTCGCAGCTTTGAGTCTCTGCAGTTGGGACGGATGTCGGTGGATATGAACTTTCCGTCTGAGTTCTCTTCGATCTCACAAGATAGTGACAGAATGTCTATCTCATCACAGTCTATGGAAGATGTAGAGGCCGAGATGCGGAGGCTGAAGCTAGAACTCAAGCAAACCATGGAAATGTACAGTACAGCCTGCAAGGAAGCTCTTACAGCAAAACAAAAGGCGGTCGAGCTACAACGCTGGAAACTAGAAGAAGAACAAAGATTAGAAGAGGCAAGATTGGCGGGGGAAGCTGCATTGGCACTAGCCGAACAAGAGAAGGCGAAGTCGAAAGCAGCAATTGAGGCAGCTGAAGCAGCTAGAAGAATTGCAGAATTGGAAGCACAGAAAAGAATGAAGGCTGAAATGAAAGCACTCAAAGAAGCTGAAGAGAAGAAAAAGGCATTTGATGCATTGGCACAAAATGATATCAGGTATAGAAAGTATACAATCGAGGAGATCGAAGAGGCAACAGAGTTCTTTTCCGAATCTCGTAGGATCGGAGAAGGAGGATATGGTCCTGTTTACAAGTGTGATCTTGATCATACTCCTGTTGCCATTAAGGTTCTACGTCCCGATGCGACTCAAGGACGATCTCAGTTTAAACAAGAGGTAGAAGTACTCAGCTGTATACGTCATCCAAACATGGTTCTCCTCCTTGGAGCTTGCCCCGAGTACGGCTGCTTGGTCTATGAGTTCATGGCTAATGGGAGCTTAGAAGACCGACTTCTGCGACGAGGAAACACGCCTCCACTTTCATGGCAACTTAGGTTTAAAATTGCAGCTGAAATTGGAACAGCATTGTTGTTCTTGCACCAAACAAAGCCAGAGCCTCTTGTGCATCGCGATCTCAAACCAGCTAACATTCTGCTCGATCGTAACTTTGTTAGTAAGATCAGTGATGTTGGCTTGGCTAGGCTTGTACCGCCATCCATTGCCGATAGCGTAACACAATATCGAATGACATCAACTGCTGGAACATTTTGCTACATTGATCCAGAGTATCAACAAACAGGTATGCTTGGTGTGAAATCCGACATATACTCGCTAGGCATCATGTTTCTCCAACTTATAACTTCTAGGCCGCCAATGGGATTAACTCACCATGTCGAAAGAGCTATCGAGAAGGGAACGTTCGAAAATATTCTCGATCCAGCTGTCCCTGATTGGCCTATTGAAGAAGCTTTGTCTTTCGCCAAGTTGTCACTCAAGTGCGCCGAGTTAAGACGTAAAGATAGGCCAGATCTTGGGAAGGTCATCCTTCCAGAGCTTAACAGGTTGAGAATTATTGCAGAAGAAACAATGCATCCAACACTGATGGGAGATATAAGCCCTTCTCGCAGCAGCAGTCAAGTTTCTTTTCAGTTGGGAGCAATGGCTTCATCTCCGCAATCATACAACAGCTCGAGAAATCCATCGGCTAATTTTTGA 2328 44.12 MWLPRYSLERKERLNVNGFVAVAIDKDKGSQGALKWAIDHLLQRGHTIFLIHVKLRSPSNSSQKMSLKSDSESSVKELFLPFRCFCTRKDIQCKDVVLEDTDVAKAIIEYAANTAIENIVVGASAKSGFLRFKATDVPGSVVKGAPDFCNVFVISKGKIQSMRSASRPAPPVTALRGQLAQQSSAKSDMPDFPVSHSASARASLDKPPLDLPSKSQDEADFMRSPFTRKGYNYKASYGDLSMQDSDISYVSSGRPSIDRIFPSLYDSQDMGGRATPPQISSSTDLDLTRSFESLQLGRMSVDMNFPSEFSSISQDSDRMSISSQSMEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEEQRLEEARLAGEAALALAEQEKAKSKAAIEAAEAARRIAELEAQKRMKAEMKALKEAEEKKKAFDALAQNDIRYRKYTIEEIEEATEFFSESRRIGEGGYGPVYKCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLLRRGNTPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSIADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIEKGTFENILDPAVPDWPIEEALSFAKLSLKCAELRRKDRPDLGKVILPELNRLRIIAEETMHPTLMGDISPSRSSSQVSFQLGAMASSPQSYNSSRNPSANF 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35422930 35427453 + CaPI482276_05g028350.1 Cam05g2835 128239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2835 775 SUPERFAMILY Protein kinase-like (PK-like) 443 718 IPR011009 -
Cam05g2835 775 MobiDBLite consensus disorder prediction 176 190 - -
Cam05g2835 775 PANTHER OS02G0152300 PROTEIN 20 745 IPR051348 -
Cam05g2835 775 FunFam U-box domain-containing protein 51 533 733 - -
Cam05g2835 775 Coils Coil 352 372 - -
Cam05g2835 775 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 432 532 - -
Cam05g2835 775 ProSiteProfiles Protein kinase domain profile. 460 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2835 775 SMART serkin_6 460 729 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2835 775 Pfam Universal stress protein family 20 146 IPR006016 -
Cam05g2835 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g2835 775 Pfam Protein kinase domain 461 714 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2835 775 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 154 - -
Cam05g2835 775 CDD STK_N 20 157 - -
Cam05g2835 775 Coils Coil 319 346 - -
Cam05g2835 775 Gene3D Phosphorylase Kinase; domain 1 438 532 - -
Cam05g2835 775 MobiDBLite consensus disorder prediction 164 222 - -
Cam05g2835 775 Gene3D Transferase(Phosphotransferase) domain 1 533 736 - -
Cam05g2835 775 Gene3D HUPs 20 154 IPR014729 -
Cam05g2835 775 Coils Coil 386 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0472 Cam-Chr1:5045333 Cam05g2835 Cam-Chr5:35422930 6.10E-111 dispersed
Cam02g0467 Cam-Chr2:5336053 Cam05g2835 Cam-Chr5:35422930 4.40E-243 dispersed
Cam05g2835 Cam-Chr5:35422930 Cam08g1714 Cam-Chr8:23433888 8.90E-295 dispersed
Cam05g2835 Cam-Chr5:35422930 Cam08g1453 Cam-Chr8:20830452 1.80E-207 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85228 PF00069 Pkinase 5.30E-39 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2835 - - - 0.0