Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2838 ATGGCGCCGGGATTGGGGTTTTTATGTCGGTGGGGTAAAGAGAAAGACTCTCAAAAGGGAACTCCGGTGGTTGTGACGATGGAGAAACCTAATTTCTCCGTCGTGGAGATCGACGGTCCCGACGCTGCATTCCGGCCGGTGGAGAAAAGTAGAGGCAAAAATGCTAAACAGGTCACGTGGGTTCTTCTTCTGAAGGCCAATCGAGCCGTCGGTTGCATAACTTGGCTTGTAACTGTTCTCTGGGCATTGTTGGGAACAATCAAGAAGAGGCTGATCTACAGGCAAGGAGTCGCCATTGAAGGGGGGAAGTTGGGAAGAGGGAAGCTATTGTTTGGAGTTATTAGAGTTTTCTTAGTAGCTTCCATTGCGATTCTTGCTTTTGAAATGCTTGCTTATTTCAAAGGCTGGCATTATTTTCAGAATTCCAATCTGCATATTCCTCAAGCTTCTGAGTTGCAAGGATTGCTTCATTCGCTCTATGTTGCTTGGTTAACTTTTAGAGCAGAGTACATTGCACCCCTCATCCAAACACTCTCTAAATTTTGCATTGTTCTGTTCCTTATCCAATCTGTGGATCGTATGATCCTTTGTCTTGGTTGCCTGTGGATAAAGTACAAAAGAATTGAGCCCAAGATTGAAGGGGATCCCTTCAAGTTGGATGATGAGGAGGGAGCTGGGCACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGTGAGGTTTATGAGCAGTCTATCTCTGCAGTCTGTCAGATTGATTGGCCAAGGGGCCATTTACTAATTCAAGTTCTTGATGATTCTGATGATGAGAGCATCCAACTGCTAATTAAGGCAGAGGTTGCTAAATGGAGCCAAAAGGGGGTAAACATAGTGTATCGCCATCGATTAGTAAGGACAGGATATAAAGCTGGGAATCTCAAGTCTGCAATGAGTTGTGATTATGTTAGAGACTATGAGTTTGTAGCAATTTTTGATGCTGACTTTCAACCTAATCCAGATTTTCTTAAATTAACCATTCCCCATTTCAAGGATAACCCGGAGCTAGGTTTGGTTCAGGCCAGATGGTCTTTTGTGAACCGGGATGAAAATTTGTTGACACGCCTTCAAAATATTAACTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTTAATGGGGTGTTCCTTAATTTCTTTGGTTTCAATGGCACTGCTGGTGTTTGGAGGATTAAAGCCCTGGAGGAGTCTGGAGGGTGGCTTGAAAGAACCACAGTAGAGGATATGGACATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTTGTATTTCTAAACGACGTTAAGGTCCTTTGTGAGGTTCCTGAGTCCTATGAAGCTTATAGGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTATTCAGGTTGTGTCTTCCAGCAGTCATAAGTTCTAAGATATCAACATGGAAGAAGGCAAATTTGATACTGTTGTTCTTTCTATTAAGGAAGCTTATCCTTCCATTCTATTCCTTCACTTTGTTCTGCATAATTCTTCCTCTAACCATGTTTGTTCCAGAAGCCGAGCTTCCTGTATGGGTGATCTGTTATGTGCCTGTCTTCATGTCATTACTAAACATTCTTCCATCCCCAAAATCTTTTCCTTTTATTGTCCCTTACCTTCTTTTTGAGAACACTATGTCTGTCACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGTTAGGTAGTTCTTATGAGTGGATTGTGACCAAAAAGGCTGGCAGGTCCTCCGAATCCGACTTACTGGCTGCTGCTGAAAGGGACTCTAAGACAATGAATCAAGTGTCGATCTGTAGAGGTGCGTCAGAGAGTGAGATTTCTGAGTTGGCTCACTTAAAGGAACGCAAAGAAGTCGTCTCTGCGCCTGTCAAAAAAGTTAACAAGATATACCGGAAAGAGCTAGCACTCGCGTTTCTTTTACTGTTAGCCTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTTCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTGA 2088 43.53 MAPGLGFLCRWGKEKDSQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLVTVLWALLGTIKKRLIYRQGVAIEGGKLGRGKLLFGVIRVFLVASIAILAFEMLAYFKGWHYFQNSNLHIPQASELQGLLHSLYVAWLTFRAEYIAPLIQTLSKFCIVLFLIQSVDRMILCLGCLWIKYKRIEPKIEGDPFKLDDEEGAGHKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRGHLLIQVLDDSDDESIQLLIKAEVAKWSQKGVNIVYRHRLVRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTIPHFKDNPELGLVQARWSFVNRDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAVISSKISTWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSLLNILPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAERDSKTMNQVSICRGASESEISELAHLKERKEVVSAPVKKVNKIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35463460 35466264 + CaPI482276_05g028380.1 Cam05g2838 128242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2838 695 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 151 694 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cam05g2838 695 Pfam Glycosyl transferase family group 2 324 535 IPR001173 -
Cam05g2838 695 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Cam05g2838 695 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 449 IPR029044 -
Cam05g2838 695 FunFam probable xyloglucan glycosyltransferase 5 223 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2838 Cam-Chr5:35463460 Cam09g1925 Cam-Chr9:33965164 4.20E-272 dispersed
Cam05g2838 Cam-Chr5:35463460 Cam08g1257 Cam-Chr8:18897857 8.60E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2838 - - - 0.0