Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2862 ATGGCCACTCCCCTTTTCCGGTCGTCGGTTTTCTTGGCTGTTTTTGTTTCTCAGGTGGTCTTCTCCGCCTCATCCTGGACAGTCAAATATCTGCCTGGATTCTCAGGTCCTCTTCCGTTTGAACTTGAAACTGGGTATGTGGGAGTGGGGGATTCGGAGGAAGTTCAGTTGTTTTATTACTTTGTCAAGTCCCAAGGAAATCCCCAAACCGATCCTCTAATGACTTGGTTGGCCGGCGGCCCTGGTTGCTCTGCTTTCTCTGGTCTCGCCTTTGAAATTGGTCCTATAAATTTCAAGGTAGAGCCATACAATGGAACCGTACCTCAACTAATCTTGAATCCTGATGCATGGACTAAGAAAGCTAGTATTCTATTTATAGATTCGCCTGTTGGCACTGGATTTTCATATAGTCGAACTCTACGAGGCTCCAAAAGAGGAGATTTTTTACAAGTAGAACAAATTCATCAATTTTTAAGAAAGTGGCTCGCAAACCACCCAGAATTTATATCTAATCCATTTTACGTTGGTGGAGACTCTTACTCTGGTATGATTGTTCCACCTGTTACTCAAGCAATCTCAGAAGGAAACAAACACGAAGTCCCACTTATAAACCTCCAGGGATACATCGTGGGAAATCCAGTCAGCATACGTAAAACAAACGATAATTCTAGGATTCCTTTTGCTTATAGATTGACGCTCATCTCTACAGAATTGTATGAGTCATTAACAAGTAGTTGCAAAGGAGAATATGAAAATGTTGATCCAAATAACGAGGAGTGCGTCAATCATGTATCAAACTTCAAAAAGTGTGTGGGTAAAATCAATTATTGGTGTATTTCTTGCCCTTATTGTGAGGATGTATCTTCGGCGCCACAAGATAAGTTTGGACGGCGAAGATCTCTCCACAACACCTCCCAGGAAGTGCTTCTTGCTACCAGAGTGTTACCTCCTCCTTCTCTTGACTGTCAAGAGTATAAGTACTACCTTAGTTACTATTGGGCAAACGATGACCAAGTTCGAAAAGCACTTCACATACGTGAGGGAACTATTGAAGAATGGATAAGATGCCAGAATCGTAAAAGTTACGAATATGATATTATGAGTGTTGTTCCTTATCATGCGAATCTTAGTTTTAAAGGTTATCGATCTTTGGTTTTTAGTGGGGATCATGATCTGATGGTGCCGGTCATAGACACCGAAGCATGGGTCAGGTCGCTAAGTTATCGTATTGTCGATGATTGGAGACCTTGGTTTAACACGGAAGATCAAATACTTGGATACACAAGAACGTATGTAAATAACATGACATTTGCGACCATTAAAGGTGGAGGGCACACACCAGAATTCATGCAAACTCAAAGTCGCGTAATGTTTTATAGATGGATACAAGGAGAATCTTTATGA 1404 41.38 MATPLFRSSVFLAVFVSQVVFSASSWTVKYLPGFSGPLPFELETGYVGVGDSEEVQLFYYFVKSQGNPQTDPLMTWLAGGPGCSAFSGLAFEIGPINFKVEPYNGTVPQLILNPDAWTKKASILFIDSPVGTGFSYSRTLRGSKRGDFLQVEQIHQFLRKWLANHPEFISNPFYVGGDSYSGMIVPPVTQAISEGNKHEVPLINLQGYIVGNPVSIRKTNDNSRIPFAYRLTLISTELYESLTSSCKGEYENVDPNNEECVNHVSNFKKCVGKINYWCISCPYCEDVSSAPQDKFGRRRSLHNTSQEVLLATRVLPPPSLDCQEYKYYLSYYWANDDQVRKALHIREGTIEEWIRCQNRKSYEYDIMSVVPYHANLSFKGYRSLVFSGDHDLMVPVIDTEAWVRSLSYRIVDDWRPWFNTEDQILGYTRTYVNNMTFATIKGGGHTPEFMQTQSRVMFYRWIQGESL 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35633333 35636947 + CaPI482276_05g028620.1 Cam05g2862 128266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2862 467 SUPERFAMILY alpha/beta-Hydrolases 27 465 IPR029058 -
Cam05g2862 467 FunFam Serine carboxypeptidase-like 11 22 467 - -
Cam05g2862 467 Gene3D alpha/beta hydrolase 22 295 IPR029058 -
Cam05g2862 467 Gene3D - 320 467 - -
Cam05g2862 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2862 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2862 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2862 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2862 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 24 461 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cam05g2862 467 FunFam Carboxypeptidase 321 466 - -
Cam05g2862 467 Pfam Serine carboxypeptidase 32 464 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2862 Cam-Chr5:35633333 Cam09g0771 Cam-Chr9:7841542 2.80E-94 dispersed
Cam05g2862 Cam-Chr5:35633333 Cam05g2863 Cam-Chr5:35640034 3.70E-163 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2862 K16296 - csv:101210918 542.732