Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2863 ATGGCCACCTTCGCCACCGTCCTTTTCCGATGCTCTGTTTTCCTCCTCCTACTTTTTCAGCTCTTCTCCGCCGCTGCCGCCACCGGAGGATCATACTCGAGGGTGAAGTATCTGCCGGGATTCTCAGGACCTCTTCCCTTCCAACTAGAAACTGGATACGTTGGTGTGGGAGATTCAGATCAATTTCAGATTTTTCACTATTTTACCAAATCTGAAGCAAATCCCAAAACGGATCCTCTCATTATTTGGCTTACCGGAGGTCCCGGTTGCTCTGCGCTCTCCGGACTTGCCTTTGAAATTGGTCCTATAAGTTTTGATGAAGAATCAAACGAAGGGAGCATTCCTCGATTAATCTTAAATCCCTATTCATGGACGAAGAAATGTAGCATAATATTTGTAGATTTACCTGCGGGGACTGGATTTTCATATGATACAACTTCGTCTACCTTTAAACCGGGAGATTTTAATCAAATTCACCACTATCTTCAATTCTTGAGAAAGTGGTTTGTTGATCATCCAGAGTTTACAACAAATCCATTCTATATTGGCGGAGATTCATACTCTGGGATGATTGTTCCGGTAGTTGCTCAAAAAATTGTAGAAGGAAATACACATGATTTTTCATTTATAAATTTTCAGGGCTATATATTGGGAAATCCTTACACTATTCGTGATTCAGGTGACAATTTTGCAATTCCTTTTGCTCATAGGATGACTCTTATATCTGATGAATTATTTGAGTCATTGAAAACTAGTTGTAAAGGAAAATATGTGAACATTGATCCAAGCAATGTGGAGTGTTTAAGACATTACGAGACGTATAAAAAGTGTATATCGAAAGTCGAGCCTGCAAATATTTTGGATCCAAAGTGTCAATTTCAGTCTCCAAAGCAACAAGATGTACATGATCGAAGATCTCTCAATAGCATCTCAAAGTCGTTGTTTGATCAAAGCACACCACTCTACTTCCGTTTTCGTAGTAGTAGTTGTCCTGAGTTTAAATACAAACTTTCTAATGATTGGGCTAACGCGGAACAAGTTCGGAAGGCACTTCACATTCGTGAGGGAAGTATTGGAGAATGGATAAGATGTAATAACAGAAAAGAAATGTATAATTTTGAACTCGATACTGTTTTCCCTTATCATGTGAACCTTAGTTCTAAAGGATATCGATCTTTGATCTATAGTGGGGATCATGATATGTTAGTGCCCCACTTGGACACTCAGGCATGGATCAAAGCTTTAAACTACTCAATTGTTGATGATTGGAGACCATGGTTTATCTTGGATCAAGTAGCCGGATATACCCGATACTATGCAAATAAGATGACATTTGCAACTATAAAAGGTGGAGGGCACACAGCAGAATACACAAAAAGAGAATGCAGCATAATGTTTAGCAGATGGATATCAGGACAATCCTTATGA 1428 39.22 MATFATVLFRCSVFLLLLFQLFSAAAATGGSYSRVKYLPGFSGPLPFQLETGYVGVGDSDQFQIFHYFTKSEANPKTDPLIIWLTGGPGCSALSGLAFEIGPISFDEESNEGSIPRLILNPYSWTKKCSIIFVDLPAGTGFSYDTTSSTFKPGDFNQIHHYLQFLRKWFVDHPEFTTNPFYIGGDSYSGMIVPVVAQKIVEGNTHDFSFINFQGYILGNPYTIRDSGDNFAIPFAHRMTLISDELFESLKTSCKGKYVNIDPSNVECLRHYETYKKCISKVEPANILDPKCQFQSPKQQDVHDRRSLNSISKSLFDQSTPLYFRFRSSSCPEFKYKLSNDWANAEQVRKALHIREGSIGEWIRCNNRKEMYNFELDTVFPYHVNLSSKGYRSLIYSGDHDMLVPHLDTQAWIKALNYSIVDDWRPWFILDQVAGYTRYYANKMTFATIKGGGHTAEYTKRECSIMFSRWISGQSL 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35640034 35642782 + CaPI482276_05g028630.1 Cam05g2863 128267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2863 475 SUPERFAMILY alpha/beta-Hydrolases 35 474 IPR029058 -
Cam05g2863 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 469 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cam05g2863 475 Pfam Serine carboxypeptidase 39 472 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2863 475 Gene3D - 329 475 - -
Cam05g2863 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2863 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2863 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 443 456 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2863 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cam05g2863 475 FunFam Serine carboxypeptidase-like 11 29 475 - -
Cam05g2863 475 Gene3D alpha/beta hydrolase 30 302 IPR029058 -
Cam05g2863 475 FunFam Carboxypeptidase 329 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2268 Cam-Chr5:30820475 Cam05g2863 Cam-Chr5:35640034 2.80E-179 dispersed
Cam05g2270 Cam-Chr5:30835146 Cam05g2863 Cam-Chr5:35640034 7.50E-182 dispersed
Cam05g2863 Cam-Chr5:35640034 Cam09g0771 Cam-Chr9:7841542 6.10E-97 dispersed
Cam05g2862 Cam-Chr5:35633333 Cam05g2863 Cam-Chr5:35640034 3.70E-163 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2863 K16296 - csv:101207623 598.201