Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam06g0007 | ATGAGATTTCTGTTGCAGGGAAGGTCTGGGACGGAATCGGGTTCTACTTCCGGTTCCTATTCGTCCCAAAATCTTGCTTCAGAATGTCAACAGACTTCATTGAGTCCAGGGTCTGTAGAAGTTACTTCTGACACTGGCAACCTTACTATTGGGTCAAATGGCATGGATGGGCAGTATGAAATATCCGAATTAAAAAGTTCAAACAATCGTGATGTTTCTCAAGCTTTGAGAAGGATAGAGGAGCAATTAAGTTTGAATGAAGACAGCTTGAAAGACATTGGTCCATTTTATGGTCACGAGGAAGGTTCAAATTCTAACCTTATAGACTACTATGAGATGTCCAATGAGGATCAGTTTTCAGTGCTCCAGCATTCAGAAAATACTGTCCATGATAATACTTGTACGTCTGAGATGCAAGATGCTAATGGAAAACATCACCATTACAATATGGCACACGAGTTTATATTCAGTGGTGAAGGAACTCAACCATGGGGTGATGCACTTGATTCTAGTAAGACAGCCGTTCTTGAGTCTCAAGACAGACATTCTCTTCTATGGAATGAAAAAGAAAATCCATCATCACCTTCGACTGTTGACAATGGACAATGCAACTGGCTGTACAGCAGAGGAAAAACTTTTCCCATGCTAGGAGGCTGCACGTCTACAGAATATTCTTCACCACTAGACAATCATGATGTTAATTCCAACTACAACATACCATTTCTTAAACAAGAACATGGAAATTCTTTTGAGGTTGATACCAGTTTAATTGTTGCACAAGTGCAGAAATTTACAATCCACCAAATAGTACCGGAGCAGGGTCATGCCACCGAGAGTACCAAGGTCATCATTATTGGATCTTTTCTATGTGATCCTTCAGAATCTCCATGGGCTTGTATGTTTGGAGATATTGAAGTTCCTCTTCAGATTGTTCAGAACGGGGTACTTTGTTGCGAAGCACCTCCTCACCTCCCTGGGAAGGTTGCTCTCTGCATTACATCTGGCAATCAGGAACCCTGCAGTGAAGTCAGAGAGTTTGAATATAAAATGAATGTTTGCACTCATTGCCAGTCACATTCAACTGGAGCTACGAAGAGTCCAGAGGAGCTGTTATTACTTGTCAGGCTTGTGCAATTGCTGCTCTCTGACTCATCAGTGCAGAAATCTGACAAGTTAGATTCTGAATTTTGGAGCAATAATTTGAAAGCTGGTGATGATCAATGGAGTTCTTTGATAGAGGCTCTACTAGTTGGCAGTGAAACTCCTTCTGGTGCCATTGATTGGCTTCTTCAAGAGTTGCTAAAAGACAAGTTGCGACTCTGGCTTTCTTCTCAACAGAAAGATAGGCGCGATCTAGCAGGCTGTTCCTTGTCCAAGAAAGAACAAGGCGTTATACACATGATTGCCGGCTTGGGCTATGTGTGGGCACTAAACCCAATTCTCGGTTGTGGAGTAAATATAAATTTCCGTGACATTAATGGATGGACTGCTCTACACTGGGCAGCACGATTTGGAAGGGAAAAAATGGTTGCTGCACTAATAGCCTCTGGAGCATCAGCTGGCGCTGTGACTGATCCTAGTTCACAAGAACCAGATGGTAAAAGTGCAGCGTCTATCGCAGACATCCATGGACACAAGGGGCTTGCTGGTTATTTATCAGAGGTTGCACTTACTAGTCATCTTTCATCCCTCACATTTGAAGAAAGTGAGCTTCCTAAAGGCTCTGCTGAGGTAGAAGCAGAAATGACGGTAAATTGCATTTCAAATGGGAACCTCTCTTCCGCGGAGGACTATATCCCTCTAAAAAATACGTTAGCTGCAGTAAGGAATGCTGCTCAGGCAGCAGCCCGTATTCAATCTGCTTTCCGTGCACATTCTTTCAGAAAGCGACAGCAGAAAGAGGCAGCTTTTGCAGCTTGTATAGATGAGTATGGAATCGATCCAAATGACATTCAGGGGCTCTTAGCTATGTCAAAGTTGAATTTTTCTAATCGGCGTGATTACAATGCTGCTGCATTATCTATACAAAAGAAGTATAGAGGTTGGAAAGGTCGTAAAGAGTTCTTATCGCTACGTCAGAAAGTCGTGAAGATACAGGCACATGTGAGGGGTTATCAAGTTAGAAAGCATTACAAAATAATTTGTTGGGCTGTCGGAATTCTTGATAAAGTTGTATTGCGTTGGAGAAGGAAAGGAGTTGGTTTGAGAGGGTTTCGTAGCGAGGTAGGATCCATTGATGAAAGTGAAGATGATGATATTATAACGGTGTTCCGCAAACAAAAGGTGGAAGGAACCATTGATGAGGCTGTTTCACGAGTGCTATCCATGGTTGACTCTCCGGATGCTCGTCAGCAATATCATCGTATGCTTCAAGGATTTCGAGAAGCCAAGGCTGAACTTGATGGTGCCAGTAACAACCCTGCAGCATTGACTTCTCTCGCCGATGTTTCTGGAATGGAAGATTTACCCCTAGTGATTATAATTGAAGACGAACTACTCATTATGTGCCACGTGGATGTTGCTGCTACCTGTCACCCTCACAGCTGCGGTTACCCATGGCGGCCATACTTCTGA | 2574 | 43.08 | MRFLLQGRSGTESGSTSGSYSSQNLASECQQTSLSPGSVEVTSDTGNLTIGSNGMDGQYEISELKSSNNRDVSQALRRIEEQLSLNEDSLKDIGPFYGHEEGSNSNLIDYYEMSNEDQFSVLQHSENTVHDNTCTSEMQDANGKHHHYNMAHEFIFSGEGTQPWGDALDSSKTAVLESQDRHSLLWNEKENPSSPSTVDNGQCNWLYSRGKTFPMLGGCTSTEYSSPLDNHDVNSNYNIPFLKQEHGNSFEVDTSLIVAQVQKFTIHQIVPEQGHATESTKVIIIGSFLCDPSESPWACMFGDIEVPLQIVQNGVLCCEAPPHLPGKVALCITSGNQEPCSEVREFEYKMNVCTHCQSHSTGATKSPEELLLLVRLVQLLLSDSSVQKSDKLDSEFWSNNLKAGDDQWSSLIEALLVGSETPSGAIDWLLQELLKDKLRLWLSSQQKDRRDLAGCSLSKKEQGVIHMIAGLGYVWALNPILGCGVNINFRDINGWTALHWAARFGREKMVAALIASGASAGAVTDPSSQEPDGKSAASIADIHGHKGLAGYLSEVALTSHLSSLTFEESELPKGSAEVEAEMTVNCISNGNLSSAEDYIPLKNTLAAVRNAAQAAARIQSAFRAHSFRKRQQKEAAFAACIDEYGIDPNDIQGLLAMSKLNFSNRRDYNAAALSIQKKYRGWKGRKEFLSLRQKVVKIQAHVRGYQVRKHYKIICWAVGILDKVVLRWRRKGVGLRGFRSEVGSIDESEDDDIITVFRKQKVEGTIDEAVSRVLSMVDSPDARQQYHRMLQGFREAKAELDGASNNPAALTSLADVSGMEDLPLVIIIEDELLIMCHVDVAATCHPHSCGYPWRPYF | 857 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1867352 | 1875169 | - | CaPI482276_06g000070.1 | Cam06g0007 | 128307 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam06g0007 | 857 | ProSiteProfiles | IQ motif profile. | 668 | 697 | - | - | |
Cam06g0007 | 857 | ProSiteProfiles | Ankyrin repeat region circular profile. | 493 | 519 | - | - | |
Cam06g0007 | 857 | SUPERFAMILY | E set domains | 265 | 348 | IPR014756 | - | |
Cam06g0007 | 857 | ProSiteProfiles | IQ motif profile. | 611 | 639 | - | - | |
Cam06g0007 | 857 | PANTHER | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA | 73 | 797 | - | GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER) | |
Cam06g0007 | 857 | SMART | ANK_2a | 493 | 522 | IPR002110 | GO:0005515(InterPro) | |
Cam06g0007 | 857 | Pfam | Ankyrin repeats (3 copies) | 466 | 552 | IPR002110 | GO:0005515(InterPro) | |
Cam06g0007 | 857 | SMART | iq_5 | 610 | 632 | IPR000048 | GO:0005515(InterPro) | |
Cam06g0007 | 857 | SMART | iq_5 | 690 | 712 | IPR000048 | GO:0005515(InterPro) | |
Cam06g0007 | 857 | SMART | iq_5 | 667 | 689 | IPR000048 | GO:0005515(InterPro) | |
Cam06g0007 | 857 | FunFam | Calmodulin-binding transcription activator 2 | 667 | 715 | - | - | |
Cam06g0007 | 857 | Pfam | IQ calmodulin-binding motif | 670 | 688 | IPR000048 | GO:0005515(InterPro) | |
Cam06g0007 | 857 | Pfam | IQ calmodulin-binding motif | 693 | 712 | IPR000048 | GO:0005515(InterPro) | |
Cam06g0007 | 857 | ProSiteProfiles | IQ motif profile. | 691 | 715 | - | - | |
Cam06g0007 | 857 | Gene3D | - | 668 | 715 | - | - | |
Cam06g0007 | 857 | SUPERFAMILY | Ankyrin repeat | 463 | 554 | IPR036770 | - | |
Cam06g0007 | 857 | Pfam | IPT/TIG domain | 265 | 338 | IPR002909 | - | |
Cam06g0007 | 857 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Cam06g0007 | 857 | Gene3D | Immunoglobulins | 259 | 352 | IPR013783 | - | |
Cam06g0007 | 857 | MobiDBLite | consensus disorder prediction | 8 | 54 | - | - | |
Cam06g0007 | 857 | CDD | IPT | 265 | 349 | - | - | |
Cam06g0007 | 857 | Gene3D | - | 424 | 555 | IPR036770 | - | |
Cam06g0007 | 857 | ProSiteProfiles | Ankyrin repeat profile. | 493 | 525 | IPR002110 | GO:0005515(InterPro) | |
Cam06g0007 | 857 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 613 | 719 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam06g0007 | Cam-Chr6:1867352 | Cam10g0871 | Cam-Chr10:19560520 | 5.30E-107 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam06g0007 | K21596 | - | csv:101222798 | 1390.94 |