Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0008 ATGATGAACGCCGGATATGATATTAATGATCTTTATCGAGAAGCACAAACCCGTTGGCTGAAGCCTCCAGAAGTGTTCTTTATTTTACAGAATCATGAGAATTATCAGCTGACTGAGGAGGCTCCTAAACAGCCAACTAGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAAAGATGGTCATAGCTGGAGGAAGAAAAGGGACGGAAGAACTGTTGGAGAAGCACATGAACGACTTAAGGTTGGAAATGCTGAAGCGTTAAATTGCTATTATGCACATGGAGAGCACAACCCCAATTTCCAGAGACGTAGCTATTGGATGCTGGATCAGTCATGTGATCACATTGTTCTTGTACACTACAGAGATATCAGTGAGGCTCTGGAGTTAGGGATCTCATGGACAACACCCCACTTTGATCAAGTGTCCAGCTGTTATAGTGTCCTCCCTAGCCAAGAGCCTGATGGCCCCTAA 486 44.03 MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQSCDHIVLVHYRDISEALELGISWTTPHFDQVSSCYSVLPSQEPDGP 161
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1880328 1886225 - CaPI482276_06g000080.1 Cam06g0008 128308
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0008 161 ProSiteProfiles CG-1 DNA-binding domain profile. 8 134 IPR005559 GO:0003677(InterPro)
Cam06g0008 161 Pfam CG-1 domain 14 127 IPR005559 GO:0003677(InterPro)
Cam06g0008 161 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 132 - GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Cam06g0008 161 SMART CG_1_2 11 129 IPR005559 GO:0003677(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0008 Cam-Chr6:1880328 Cam09g1648 Cam-Chr9:28137002 8.60E-43 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0008 K21596 - csv:101222798 271.166