Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0017 ATGGAACCCTATCGTCCTCAGGGAAAATCTTCCATCACAACCAGTTCCACTACCAATCTTCCTCTCTACCGCTCTGCTCCTCCTCTTGAAGTCAAGCTCGAAGATTTCGAGCTTTATGCTATAGATCGTCTTCGAGTTCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTGGAATACCAATATGAAACATTCTGAGGATGTGAACAAGGATATAATCTCTCACTTTGTTTTGCGCCTTGTATACTGCAGAACGGAGGAATTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTCCGACACCGTTTTCTTTATGCAAGTTCTGAATCTCAGAAGCAGGTCTTTGTGGAGCTTGGTCTCCCATACAAAGCAATCAGTTATGCAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGACTGTACCAAGTGGTGATGCTATATACTATAAGGTACCATGGGAAGAAGTTCCAGAGCTAGTGGCTGGTCGAAGAATATTTCTCCATAAAGGATATGCATATATTCCTATGTATCAGGTGGTTTCCCTTGCTGCAACACAATTCCGCAGTTACCTATCAAAGGCCCTAAGTCTGACAAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATAGGTTGACCCCAATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCACAGCCAAGAGAGTATGGTGATATATCAATAAAAGACCTTGACCAAATAGCTAAAAGTTCATTTCCTCTTTGCATGCGACACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAAAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCGCCTTATTCCTGTCAAAAAATAATCTCATCATCACCTAGTGTTGGAGATCATCATGGATGTCCCTACAGACATTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAAAAACAGGACAATGGACGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCGATCCATGGCTCGTCGTGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAGAAGGTCCTTCAATCTAAGAACAATTCAACAGCCTAG 1350 41.33 MEPYRPQGKSSITTSSTTNLPLYRSAPPLEVKLEDFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELWNTNMKHSEDVNKDIISHFVLRLVYCRTEELRKWFLSMETMLFRHRFLYASSESQKQVFVELGLPYKAISYAEFEAVKDKLVQVARLIGQTVPSGDAIYYKVPWEEVPELVAGRRIFLHKGYAYIPMYQVVSLAATQFRSYLSKALSLTNRKWTSTIREQEKDRLTPIVEALCTSYLGPDYSQPREYGDISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKIISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVKNRTMDDIMDKVRNRHYQLACTLTFESIHGSSCDAGINHPNQYFIDSQKVLQSKNNSTA 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2013543 2022006 - CaPI482276_06g000170.1 Cam06g0017 128317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0017 449 PIRSF DNA_primase_large 3 449 IPR016558 -
Cam06g0017 449 CDD PriL_PriS_Eukaryotic 22 437 IPR016558 -
Cam06g0017 449 Pfam Eukaryotic and archaeal DNA primase, large subunit 169 434 IPR007238 GO:0006269(InterPro)
Cam06g0017 449 Gene3D - 4 242 - -
Cam06g0017 449 PANTHER DNA PRIMASE LARGE SUBUNIT 15 446 IPR007238 GO:0005658(PANTHER)|GO:0006269(InterPro)|GO:0006269(PANTHER)|GO:0006270(PANTHER)
Cam06g0017 449 FunFam DNA primase large subunit 5 242 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0017 K02685 - csv:101217274 828.935