Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0070 ATGGAGACCACCACCTATTTTCCATTTTTAGTTACATTCTTGGCTTTGCTTTCCATTTTCTTGTTCCAAAAAACAAAAAACAGAACAAAAAAGAATCTCCCTCCAACTCCTCTGGCTCTCCCAATCCTTGGCCATCTTCATCTCCTCAAACACCCAATCCACAGAACTCTCCACTCTCTCGCCCAAAAATACGGCCCAATCTTCACTCTCCGTCTCGGCGCTCGTCTCGTCGTCGTCGTCTCCTCCACATCCGCCGTCGAAGAATGCTTCACAACAAACGACATCGTTTTCGCAAACCGACCCGAATTCGTCTCCGGCAAGTACCTCAGCTACGGTAACAGCACGCTTGGGGCAGCCCCATATGGCGATCATTGGCGCAATTTACGGCGGTTGAGCGCAACGGAAGTCTTGTCGTCGATCCGGTTGAACGTGTCAGCAGGAATCCGAAAGGAAGAGATCGAGATTTTGCTTAGGAAATTGTACAGAGTTTCGAGAACAGAGTTTGGGAAAGTGAAGTTGAAATCATTGTTCTCGGAGTTGACATTCAATATGATAATGAGAATGGTGGCTGGAAAAAGGTATTATGGGGAAGAAGTGAGTGAATTGGAAGAGGCGAAAAAGTTCAGAGAAATAATGGAGAAGTCGTTCCAATTGGGATCATATCCAGGGGATTTCTTGCCATTCTTGAAATGGGTTGATTGGCAATACACAAAAAGAGTGGAAAGTCTTGGAAGAGATACGGATTCGTTCTTGCAAAATTTGGTGGATGAACATCGAAGAAATGAAGAGGAAGGGAAAAAGGGGAATACAATGATTAGCCATCTCCTCTGTTTGCAGAAAACTCAGCCCGACTATTACACTGATGAAATTATTAAAGGCCTCATCGTTACAATTTTGTCAGCAGCAACGGAGACATCATCAGTGACAATAGAATGGGCAATGTCAAATCTCCTAAACCATCCAGAATCATTAAACAAAGTGAAGAATGAATTGGACACAAAAATAGGGGAAGACCGGATTCTAGATGAAGAAGATATCTCAAATTTACCATATCTTCAAAATGTAATTTCAGAGACACTACGACTTTATCCAGCAGCTCCACTCTTAGCTCCACATTTATCATCACAAAATTGTTGTTTAGGAGGATACAACATTCCAGCTGACACAATCTTAATGGTCAATGCATGGGCTGTTCAAAGAGATCCCAAAGTTTGGGAAGATTCAACAAGCTTTAAACCTGAGAGGTTTGAAAGTGAAGGAGGAGCTACCAATAATGGTTATAAATTCTTGCCATTTGGATTGGGAAGAAGGGCTTGTCCTGGGATGGGAATGGCTAACCGTGTGGTGGGCTTGACTTTGGGTTCGTTGATTCAGGGGTTTGAGTGGAAGAGAGTGAGTGAAAAGGAGATTGATATGACTGAAGGTCAAGGGATTTCTATGCCTAAAGTTGAGCCATTGGAGGCATTGTGTAGAGCTCGTCCCATCATCAACAAGCTTGCATTAGATTAA 1509 43.14 METTTYFPFLVTFLALLSIFLFQKTKNRTKKNLPPTPLALPILGHLHLLKHPIHRTLHSLAQKYGPIFTLRLGARLVVVVSSTSAVEECFTTNDIVFANRPEFVSGKYLSYGNSTLGAAPYGDHWRNLRRLSATEVLSSIRLNVSAGIRKEEIEILLRKLYRVSRTEFGKVKLKSLFSELTFNMIMRMVAGKRYYGEEVSELEEAKKFREIMEKSFQLGSYPGDFLPFLKWVDWQYTKRVESLGRDTDSFLQNLVDEHRRNEEEGKKGNTMISHLLCLQKTQPDYYTDEIIKGLIVTILSAATETSSVTIEWAMSNLLNHPESLNKVKNELDTKIGEDRILDEEDISNLPYLQNVISETLRLYPAAPLLAPHLSSQNCCLGGYNIPADTILMVNAWAVQRDPKVWEDSTSFKPERFESEGGATNNGYKFLPFGLGRRACPGMGMANRVVGLTLGSLIQGFEWKRVSEKEIDMTEGQGISMPKVEPLEALCRARPIINKLALD 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2576684 2578994 + CaPI482276_06g000700.1 Cam06g0070 128370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0070 502 CDD CYP81 65 486 - -
Cam06g0070 502 PANTHER CYTOCHROME P450 82C3-RELATED 12 493 IPR050651 -
Cam06g0070 502 Pfam Cytochrome P450 34 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 FunFam Cytochrome P450 family protein 24 496 - -
Cam06g0070 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam06g0070 502 Gene3D Cytochrome P450 19 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 SUPERFAMILY Cytochrome P450 34 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0070 502 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0375 Cam-Chr1:4151252 Cam06g0070 Cam-Chr6:2576684 9.80E-21 dispersed
Cam02g0846 Cam-Chr2:11034741 Cam06g0070 Cam-Chr6:2576684 1.40E-147 dispersed
Cam02g0854 Cam-Chr2:11257366 Cam06g0070 Cam-Chr6:2576684 1.80E-150 dispersed
Cam02g0855 Cam-Chr2:11272123 Cam06g0070 Cam-Chr6:2576684 2.40E-147 dispersed
Cam05g2236 Cam-Chr5:30603446 Cam06g0070 Cam-Chr6:2576684 4.10E-147 dispersed
Cam06g0070 Cam-Chr6:2576684 Cam06g0072 Cam-Chr6:2588933 7.00E-168 dispersed
Cam09g1743 Cam-Chr9:31295069 Cam06g0070 Cam-Chr6:2576684 2.50E-51 dispersed
Cam06g0070 Cam-Chr6:2576684 Cam06g0071 Cam-Chr6:2584547 3.40E-48 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0070 K13260 - cmo:103498908 876.315