Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam06g0071 | ATGGATGGTTGGCTAACAGCGCTCCTTGCCCTTTCAATTTGTGCAGTCTTACACTTAGTTTTGAGCTTTATTTTACATCGCAACCAAAATCTCCCACCCGGTCCTCTTGCTTTACCTCTTATAGGCAATCCCATATGGCTTTTCAAGCCTCTTTCCCAACTTGAAACCATTCTTCGCCATTACCATTCCAAATACGGCCCTGTTGTTACCCTTTACTTTGGTAACACTCCTTCCATTTTCATAGCTAGCCACTCTGTTTCTCACCATGCTTTGGTTCAAAACGGCGCCGTCTTCGCCGACCGTTTCCCCGTCATGGAAACTGCCAAAATCATCACTAGTAACCAACATAATATCAGCACCGCCTTCTACGGTCCCACATGGCGTATTCTCCGCCGCAACCTCACCTCCGAGCTCCTCCATCCGTCTCGATTGAAAGCTCACTCGCCTACTCGTAAATGGGTGTCGGATGATCTCGTCCATCGCCTCCATCAGGCCCCTGGTCCTGTAAAGCTCCTTGACCATCTTCGTTATGCTATGTTTTGTTTAGCTACAACTATGTGTTTTGGGGAGAGATTTGATGAGAAATTGATTCGTGAAATACAAGAATCTCAACGTGGGGTGTTGTTGAATATCACCAAGTTCAATGATCTTAATTTTTGGCCTCCTAGATTGGGGAAGTTTTTGTTCAAGAAGCGTTGGGAAGAGATTCGTCAACTACGTAAACGTCAAGATGATTGCTTATTACCTTTGATTAACAAAGCAAGACAAAACAGAACAACAATCAAAGATAAAGAAGCTGCAGGGAAGGCAATCCCTTATGTTGATACTCTGTTTGATTTGGAAATTGCTGACAACAATGATGAGAAGGTAAAGAGGAAATTGGTTGATGATGAGCTCATAACATTATGCTCTGAGTTTCTTGACGCCATTACGGATACAACGACCGTGTCGTTGCAATGGATAATGGCGAATTTAGTGAAGCAAACAGAAATTCAAGAGAAAGTGTACAAGGAGATAAAAGAAGTGATGCAAAATAAGGAGAAGAATGAAGCGATAGAAGAGGAAGATTTGGGGAAGATGACATATTTGAAAGCAGTAATAATGGAAGGACTACGGCGACATCCGCCGGGGCATTTTTTGTTGCCTCATCAAGTGATGGAGGATAGTGTTTTGGAAGGAGGATACAAGGTGCCCAAAGGAACATCAGTGAACTTTATGGTAGCAGACATGGGTTGGGACCCGAAAGTATGGCCGGAACCGACGGCGTTTAAGCCGGAGAGATTCTTGAATGATAGGTCAATGGGAGGGGTTGAATTGGAAGTTGATATCACAGGAAGTAAGGAAATAAAGATGATGCCATTTGGGGCTGGGAGGAGGATATGCCCAGGATTTGCATTGGGGTTATTGCATTTGGAGTATTACATTGGGAATTTGGTGTGGAACTTCGAGTGGAAGCCTGCTGGGGAAGTTGATTTGACTGAGACCCAAGAAAATGCTGTCACCATGAAATATCCCTTGCTTGCTTACTTGTCTCCAAGGCCTGTTTCTTAG | 1551 | 43.97 | MDGWLTALLALSICAVLHLVLSFILHRNQNLPPGPLALPLIGNPIWLFKPLSQLETILRHYHSKYGPVVTLYFGNTPSIFIASHSVSHHALVQNGAVFADRFPVMETAKIITSNQHNISTAFYGPTWRILRRNLTSELLHPSRLKAHSPTRKWVSDDLVHRLHQAPGPVKLLDHLRYAMFCLATTMCFGERFDEKLIREIQESQRGVLLNITKFNDLNFWPPRLGKFLFKKRWEEIRQLRKRQDDCLLPLINKARQNRTTIKDKEAAGKAIPYVDTLFDLEIADNNDEKVKRKLVDDELITLCSEFLDAITDTTTVSLQWIMANLVKQTEIQEKVYKEIKEVMQNKEKNEAIEEEDLGKMTYLKAVIMEGLRRHPPGHFLLPHQVMEDSVLEGGYKVPKGTSVNFMVADMGWDPKVWPEPTAFKPERFLNDRSMGGVELEVDITGSKEIKMMPFGAGRRICPGFALGLLHLEYYIGNLVWNFEWKPAGEVDLTETQENAVTMKYPLLAYLSPRPVS | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 2584547 | 2586097 | - | CaPI482276_06g000710.1 | Cam06g0071 | 128371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam06g0071 | 516 | FunFam | Cytochrome P450 family protein | 25 | 515 | - | - | |
| Cam06g0071 | 516 | Coils | Coil | 336 | 356 | - | - | |
| Cam06g0071 | 516 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 17 | 513 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cam06g0071 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam06g0071 | 516 | Pfam | Cytochrome P450 | 32 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | SUPERFAMILY | Cytochrome P450 | 30 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | Gene3D | Cytochrome P450 | 24 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0071 | 516 | CDD | CYP77_89 | 64 | 506 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g0071 | Cam-Chr6:2584547 | Cam09g1743 | Cam-Chr9:31295069 | 8.60E-153 | dispersed | |
| Cam06g0070 | Cam-Chr6:2576684 | Cam06g0071 | Cam-Chr6:2584547 | 3.40E-48 | tandem | |
| Cam06g0071 | Cam-Chr6:2584547 | Cam06g0072 | Cam-Chr6:2588933 | 6.10E-42 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam06g0071 | K24184 | - | csv:101204774 | 851.277 |