Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam06g0072 | ATGGAAGACTCCATCTCACTCTATTCAGCCATTTCAATTCTGAGTATTGCTGTAGTTTTGGCAATCATAAAGTATTTGTTTAAATCCAATTCCTACAAAAATCTTCCTCCAAGTCCACCCTCTATTCCAATTATAGGTCACCTCCATCTCCTTAAGCTCCCAGTTCATAGAAGCCTACAAACTCTCTCACAAAAGCATGGTCCAGTACTTTCTCTTCGGTTCGGCTCTCGTTTAGTCGTCATCGTTTCGTCAATGGAAGCTGCAGAAGAATGCTTCACCAAAAACGATATCGTTTTCGCAAACCGTCCCGACTTCGCCGTCAGCCGGTGCTTGAGTTACAACCAAACCACCCTCGGAGCGGCTCCGTACGGTGACCACTGGCGTAAACTTCGGCGTGTGAGTGCGCTCGAAATACTGTCTTCGAATCGGCTTAACGCAAATCACGAGATTCGGAGAGATGAAATGAGAAGAGCAATGAAGAAGATATATGAAATTTCAAGAGACGGTTATGGAAAAGTGGAGTTCAAATCAATGGTGAAGGAATTGACATTGAATATAACAATGAGAATGGTGGCAGGGAAGAGATATTATGGTGAAGAAGCAGCAAAAAGTAGTGAAGCAAGAACATTCCAAGCTATTGTGGATGAGCTTTTTGAATTTACTTTGTCTTCATATCCAGCTGACTTCTTGCCAATTTTGAAGTATATTGATATTCAAGGTTTCATGAAGAGGGCAAAGAAGCTTATCACAAGGGTTGATTCATTTTGGCAACGACTGATTGATGAACATAGAAGAGGTGAAATCAGTAATGAAGAAATGGAGAATTGTATGGTTGCTCATTTCCTTAAGTTGCAAGAGTCACAGCCTGAGTATTATACAGATGATATTATCAAAGGCTTGATTTTGACGATGATACTTGGTGGGTCAGACACTACTGCGGTGACAATAGAGTGGGCAATGTCAAATCTCCTAAACCATCCATCGGTACTGAATAAGGCAAGAGCTGAATTAGAGTCTCAACTTGGTGGAGATCGATTGCTTGAAGAATCCGATCTTTCAAAATTAAGTTACCTAAGATGTATAGTCCTAGAAACTCTTCGGTTGTACCCGGCTGGTCCGCTCCTACTGCCACATAAGTCTTCTGCTGACTGTACCATATCAGGATACGACGTGCCACGTGACACGATCTTATTGGTGAATGCGTGGGCCATCCATAGGGACCCCACATTGTGGGAAGATCCAACAAGTTTTAAACCAGAGAGGTTTGAGAATAGTGGGGAAGGGGATGCAAATAGTAAGTTAATGATAGCATTTGGTTTGGGAAGAAGAGCTTGTCCAGGAACTGGAATGGCACATAGAGTGTTGGGTTTGAGTCTTGGACTGTTGATTCAATGTTTTGATTGGAAGAGTATTGAAGGTAAGGAAATAGATATGACTGAAGGAAAAGGGGTTAGTATGCCTAAAGCTCAACCACTTGAAGCACTATGTAAAGCAAGAGAAATTGCAACCAAGCTGCTTTGA | 1521 | 42.01 | MEDSISLYSAISILSIAVVLAIIKYLFKSNSYKNLPPSPPSIPIIGHLHLLKLPVHRSLQTLSQKHGPVLSLRFGSRLVVIVSSMEAAEECFTKNDIVFANRPDFAVSRCLSYNQTTLGAAPYGDHWRKLRRVSALEILSSNRLNANHEIRRDEMRRAMKKIYEISRDGYGKVEFKSMVKELTLNITMRMVAGKRYYGEEAAKSSEARTFQAIVDELFEFTLSSYPADFLPILKYIDIQGFMKRAKKLITRVDSFWQRLIDEHRRGEISNEEMENCMVAHFLKLQESQPEYYTDDIIKGLILTMILGGSDTTAVTIEWAMSNLLNHPSVLNKARAELESQLGGDRLLEESDLSKLSYLRCIVLETLRLYPAGPLLLPHKSSADCTISGYDVPRDTILLVNAWAIHRDPTLWEDPTSFKPERFENSGEGDANSKLMIAFGLGRRACPGTGMAHRVLGLSLGLLIQCFDWKSIEGKEIDMTEGKGVSMPKAQPLEALCKAREIATKLL | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 2588933 | 2590816 | + | CaPI482276_06g000720.1 | Cam06g0072 | 128372 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam06g0072 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 438 | 447 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam06g0072 | 506 | FunFam | Cytochrome P450 family protein | 27 | 502 | - | - | |
| Cam06g0072 | 506 | CDD | CYP81 | 67 | 492 | - | - | |
| Cam06g0072 | 506 | PANTHER | CYTOCHROME P450 82C3-RELATED | 20 | 499 | IPR050651 | - | |
| Cam06g0072 | 506 | Pfam | Cytochrome P450 | 36 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | SUPERFAMILY | Cytochrome P450 | 36 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | Gene3D | Cytochrome P450 | 27 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 435 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 445 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 296 | 313 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | E-class P450 group I signature | 316 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | P450 superfamily signature | 436 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0072 | 506 | PRINTS | P450 superfamily signature | 445 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam02g0847 | Cam-Chr2:11049533 | Cam06g0072 | Cam-Chr6:2588933 | 7.50E-154 | dispersed | |
| Cam06g0070 | Cam-Chr6:2576684 | Cam06g0072 | Cam-Chr6:2588933 | 7.00E-168 | dispersed | |
| Cam06g0072 | Cam-Chr6:2588933 | Cam11g1576 | Cam-Chr11:28508279 | 8.80E-126 | dispersed | |
| Cam06g0071 | Cam-Chr6:2584547 | Cam06g0072 | Cam-Chr6:2588933 | 6.10E-42 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam06g0072 | K13260 | - | csv:101208069 | 876.7 |