Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0158 ATGGCTACTTTAAACTTAGGCTCTGCTTCTCACTTTGTTGACCAGCTTCAGCAACGCCCTGATCTCCACCTAGAATCTCCCCCAACTTCTGACCATGTCAACCACTTCAACGGCAGCGGCGGCTCCGGCGGTAGCGGCGATGTCATGGTCCGTCGCCCACGGGGTCGCCCGGCCGGCTCCAAGAACAAGCCCAAGCCACCCGTGATCATCACGCGCGAGAGCGCCAACACGCTCCGAGCTCATATCTTGGAGGTCGGTGGCGGATGCGACGTCTTCGAGGCGGTGGCCGGCTATGCTCGACGGCGACAACGGGGGATCTGTGTGTTGAGTGGGAGTGGGATTGTGAATAATGTTAGCTTGCGACAACCGGCGGCTGCTGGATCGGTGTTGACGTTGCAAGGGAGGTTCGAGATTTTGTCGTTGTCGGGATCGTTCCTACCGCCGCCTGCTCCGCCAGGTGCTACCAGTCTTACAATTTTCTTGGCCGGAGGACAAGGGCAAGTGGTGGGAGGGAATGTGGTGGGAGCTTTGATCGCGTCGGGGCCGGTCATCGTCATAGCATCGTCATTTAGTAACGTTGCATACGAGAGGTTGCCGTTGGATGAAGAAGAATTGCCGATGCAGGCGGGTGGAGGTGATGGTGACGGAGGCGACGGTGGCGGTGACGGTCACAACAACCCTTTTCCTGATGCATCTTCGGGTTTGCCGTTTCTAAATCTGCCTATGAACATGCCAAATCAGAATCAATTTTTCGGTTGA 759 56.79 MATLNLGSASHFVDQLQQRPDLHLESPPTSDHVNHFNGSGGSGGSGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGGGCDVFEAVAGYARRRQRGICVLSGSGIVNNVSLRQPAAAGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFSNVAYERLPLDEEELPMQAGGGDGDGGDGGGDGHNNPFPDASSGLPFLNLPMNMPNQNQFFG 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3483999 3485155 - CaPI482276_06g001580.1 Cam06g0158 128458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0158 252 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 208 - -
Cam06g0158 252 Gene3D - 78 208 - -
Cam06g0158 252 CDD DUF296 79 162 IPR005175 -
Cam06g0158 252 FunFam AT-hook motif nuclear-localized protein 78 205 - -
Cam06g0158 252 MobiDBLite consensus disorder prediction 205 240 - -
Cam06g0158 252 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 191 IPR005175 -
Cam06g0158 252 MobiDBLite consensus disorder prediction 22 68 - -
Cam06g0158 252 PIRSF ESCAROLA 4 250 IPR014476 GO:0003680(InterPro)
Cam06g0158 252 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 214 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam06g0158 252 ProSiteProfiles PPC domain profile profile. 75 211 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0158 Cam-Chr6:3483999 Cam10g0169 Cam-Chr10:3301644 5.80E-78 dispersed
Cam05g0298 Cam-Chr5:2841698 Cam06g0158 Cam-Chr6:3483999 5.60E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0158 - - - 0.0