Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam06g0210 | ATGGATAATTACGGCTCTTCACCTTCGTATCCATACCACAATCCTTACGCATACCCTCGTCCAGTTGCTCCTCAATACCCACCTCCTTCTCAATATCCTCCTCCTTCTCAATATCCTCCTCCTCCTCATTATACACATCCAAATTCAGATCCCTATGCTCGTCCTGCTTACCCTTATCCCTATAATCCTTCACATGCCTCTCCATTTGCATATCCCCCACCCCCATCTCATTCTGGCCTAGTAGAGTATTTTCCACACCCACCTCCACATTCTAGCCCTCTACCTTACCCATATCCTTACTCTGATGCCTCATCTACTGGTGGTGCTAGGCCATCCATTCAATATCATAACAATTTCCAACCTGGTTCATCCCCATATCGGTATCAAGAATCTAATACATACCCTCCACCAGAAAGTCAATACCCACCACCCCCTTCACGAGTAAATAGCTTCTCTGGCCACTACAGGAACGATAGCACTGATTCTGCATCATCTGTCTCTTCTGCATACCCGCCTCTGGATGACCTTTTGTGCAATGTACATTTGTCTGATCATCAACCAACTGCTCCTGCATCACCCCCTGCACCTGCACCTGCACCTGCACCTGCACAGCCTTCAGCTTCGTTATTGGCAAATTCACCTCAAAGTGCGAGATATGATCGGCGTGACCGATTTTATGGCTTTCCGAATTCATCCTTTTCTAGTTTTGACACGGGGAATTCAGATCAAATGGTTACATCCAAACAACCTTCATTTTCCCATTCAAGCTCATTCAGTGGGTCTCAACATAGTCAGAACTTGCAGATTGTTCCCTTGCATAGTAAAGCATCATTGAGAGTTTTGCTATTGCATGGAAACTTAGAAATATGGGTTAATGAGGCCAAAAATCTTCCAAATATGGACATGTTTCACAAAACCTTAGGGGATATGTTTGCAAAATTACCTGGGAACATGAGCAACAAAATTGAAGGACGCGTGAGTCATAAGATCACTAGTGATCCTTATGTATCGATCAATGTAGCAAATGCAGTAATTGGGAGGACTTTTGTTATAAGCAACAATGAAAATCCTGTATGGAGGCAACATTTCTATGTTCCCGTTGCACATTATGCTGCTGAAGTAGTTTTTGTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTGATAGGAACGGTAGCAATTCCTGCAGAACAAATATATTCAGGGTCTATGGTTGAGGGAACCTTCCCAATCCTACTTGGTGGGAAGCCATGTAAACCTGGAGCAGCTCTAAGTATTTCTATTCAGTATACCCCAATGGAGAGGCTTAGCACTTATCATCATGGAGTGGGAGCTGGCCCTGATTATCAGGGGGTTCCTGATACATATTTCCCCCTCAGAAAGGGTGGAGCTGTCACTCTTTATCAAGATGCCCATGTTCCAGATGGGCACCTTCCAAATTTGATGCTTGATAATGGTATGTACTATGTACATGGGAAGTGTTGGCATGACATCTTTGATGCTGTACGTCAGGCTCGCAGGTTAATTTACATAACTGGGTGGTCGGTGTGGCACAAAGTGAAACTAGTTCGAGATACTAGCTATGGGACAGAGTGTACCCTTGGAGATCTGCTGAGGTCAAAGTCCCAGGAGGGAGTGAGAGTTTTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACTGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAACACTCCTCTGTACAAGTGATACTTTGTCCTCGGATTGCTGGAAAACGACATAGTTGGGTTAAGCAAAAGGAAGTTGGAACTATATATACACACCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAGATCATAGCTTTTGTTGGAGGGCTTGATTTATGTGATGGGCGGTATGATACTCCATTACATCCCATATTTCGGACCCTTCAAACAGTACACAAGGATGATTACCACAATCCTACATACACGGGTAGCGTTGTTGGTTGTCCAAGAGAACCATGGCATGATCTACACAGCAAAATTGATGGTCCAGCTGCATATGATGTTTTGACTAACTTTGAGGAGCGATGGAGGAGAGCTTCAAAACCTCACGGGATAAAGAAGTTGAAATCATATGATGATGCTTTGCTGAGTATTGAAAGAATTCATGACATAATTGGAATTTCTGAAGCGCACTGCACTAATGAAAATGACCCTGAATCATGGCATGTCCAGATTTTTCGCTCAATTGATTCAACTTCTGTTAAAGATTTCCCAAAGGATCCAAAAGATGCCCCAAGCAAGAACCTCGTATGTGGAAAGAATGTGCTGATTGATATGAGTATACACACAGCATATGTGAAAGCCATTCGAGCTGCCCAACATTACATTTATATAGAGAACCAATATTTCATTGGATCATCCTTCAATTGGAATTCTAATAAAGATATAGGTGCCAACAATTTGATTCCGATGGAAATTGCGCTAAAGATTGCTGATAAAATAAGAGCAAATGAGAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCTGAGGGTGTTCCAACCGCTGCTGCCACTCAGAGAATACTATTTTGGCAGCAAAAAACCATGCAAATGATGTATGAGGTCGTTTACAAGGCTTTGATGGAGGTTGGTCTTGAGGATGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGTCTGGGAAATCGTGAGGCTATGGATGGAAATGATCCTTCATGTTCTGGAAGTCCTAATGCAGAAAACACCCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGATATATGTTCACTCCAAAGGCATGATAGTTGACGACGAGTATGTGATTTTGGGATCTGCCAACATCAACCAGAGATCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGAGCCTATCAACCTCATTATACGTGGGCAAGGAAACTTTCTCATCCTCGTGGACAGATCTATGGATATAGGATGTCATTGTGGGCGGAGCATACGGGAACTACCGAGGAGTGTTTCAACCACCCGGAGAGCCTGGAATGTGTCAAAAGAGTTAGAACAATGGGAGAATTAAACTGGAAACAGTTTGCTGCAGATGATGTAACAGAGATGAAAGGACACCTACTGAAGTACCCCGTCGAAGTCGATAGAAGAGGAAGAGTAAGATCACTTCCTGGTCATGAAAATTTTCCAGATGTAGGAGGAAAAATAGTTGGTTCATTTCTTGGCATTCAGGAGAACCTCACTATATAA | 3291 | 43.0 | MDNYGSSPSYPYHNPYAYPRPVAPQYPPPSQYPPPSQYPPPPHYTHPNSDPYARPAYPYPYNPSHASPFAYPPPPSHSGLVEYFPHPPPHSSPLPYPYPYSDASSTGGARPSIQYHNNFQPGSSPYRYQESNTYPPPESQYPPPPSRVNSFSGHYRNDSTDSASSVSSAYPPLDDLLCNVHLSDHQPTAPASPPAPAPAPAPAQPSASLLANSPQSARYDRRDRFYGFPNSSFSSFDTGNSDQMVTSKQPSFSHSSSFSGSQHSQNLQIVPLHSKASLRVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMFAKLPGNMSNKIEGRVSHKITSDPYVSINVANAVIGRTFVISNNENPVWRQHFYVPVAHYAAEVVFVVKDSDVVGSQLIGTVAIPAEQIYSGSMVEGTFPILLGGKPCKPGAALSISIQYTPMERLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGMYYVHGKCWHDIFDAVRQARRLIYITGWSVWHKVKLVRDTSYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRIAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPLHPIFRTLQTVHKDDYHNPTYTGSVVGCPREPWHDLHSKIDGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLSIERIHDIIGISEAHCTNENDPESWHVQIFRSIDSTSVKDFPKDPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDIGANNLIPMEIALKIADKIRANERFAAYIVIPMWPEGVPTAAATQRILFWQQKTMQMMYEVVYKALMEVGLEDAFSPQDYLNFFCLGNREAMDGNDPSCSGSPNAENTPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSHPRGQIYGYRMSLWAEHTGTTEECFNHPESLECVKRVRTMGELNWKQFAADDVTEMKGHLLKYPVEVDRRGRVRSLPGHENFPDVGGKIVGSFLGIQENLTI | 1096 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3908553 | 3918153 | + | CaPI482276_06g002100.1 | Cam06g0210 | 128510 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam06g0210 | 1096 | Pfam | C2 domain | 285 | 410 | IPR000008 | - | |
Cam06g0210 | 1096 | Gene3D | Endonuclease Chain A | 756 | 992 | - | - | |
Cam06g0210 | 1096 | SMART | C2_3c | 286 | 408 | IPR000008 | - | |
Cam06g0210 | 1096 | SMART | pld_4 | 609 | 644 | IPR001736 | GO:0003824(InterPro) | |
Cam06g0210 | 1096 | SMART | pld_4 | 942 | 969 | IPR001736 | GO:0003824(InterPro) | |
Cam06g0210 | 1096 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 283 | 432 | IPR035892 | - | |
Cam06g0210 | 1096 | MobiDBLite | consensus disorder prediction | 189 | 203 | - | - | |
Cam06g0210 | 1096 | MobiDBLite | consensus disorder prediction | 237 | 260 | - | - | |
Cam06g0210 | 1096 | FunFam | Phospholipase D delta | 485 | 722 | - | - | |
Cam06g0210 | 1096 | MobiDBLite | consensus disorder prediction | 105 | 135 | - | - | |
Cam06g0210 | 1096 | MobiDBLite | consensus disorder prediction | 94 | 168 | - | - | |
Cam06g0210 | 1096 | FunFam | Phospholipase D | 756 | 988 | - | - | |
Cam06g0210 | 1096 | ProSiteProfiles | C2 domain profile. | 263 | 409 | IPR000008 | - | |
Cam06g0210 | 1096 | MobiDBLite | consensus disorder prediction | 183 | 216 | - | - | |
Cam06g0210 | 1096 | SUPERFAMILY | Phospholipase D/nuclease | 747 | 1028 | - | - | |
Cam06g0210 | 1096 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 942 | 969 | IPR001736 | GO:0003824(InterPro) | |
Cam06g0210 | 1096 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 609 | 644 | IPR001736 | GO:0003824(InterPro) | |
Cam06g0210 | 1096 | MobiDBLite | consensus disorder prediction | 21 | 59 | - | - | |
Cam06g0210 | 1096 | CDD | C2_plant_PLD | 280 | 431 | - | - | |
Cam06g0210 | 1096 | Gene3D | C2 domain | 280 | 423 | IPR035892 | - | |
Cam06g0210 | 1096 | Pfam | Phospholipase D C terminal | 1016 | 1086 | IPR024632 | - | |
Cam06g0210 | 1096 | PANTHER | PHOSPHOLIPASE D | 282 | 1084 | IPR015679 | GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER) | |
Cam06g0210 | 1096 | Pfam | Phospholipase D Active site motif | 944 | 969 | IPR001736 | GO:0003824(InterPro) | |
Cam06g0210 | 1096 | Pfam | Phospholipase D Active site motif | 611 | 644 | IPR001736 | GO:0003824(InterPro) | |
Cam06g0210 | 1096 | MobiDBLite | consensus disorder prediction | 145 | 168 | - | - | |
Cam06g0210 | 1096 | Gene3D | Endonuclease Chain A | 487 | 723 | - | - | |
Cam06g0210 | 1096 | SUPERFAMILY | Phospholipase D/nuclease | 450 | 709 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g2111 | Cam-Chr1:34080221 | Cam06g0210 | Cam-Chr6:3908553 | 4.20E-262 | dispersed | |
Cam06g0210 | Cam-Chr6:3908553 | Cam10g0340 | Cam-Chr10:5529311 | 0.00E+00 | dispersed | |
Cam06g0210 | Cam-Chr6:3908553 | Cam08g1871 | Cam-Chr8:24724885 | 5.70E-271 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam06g0210 | K01115 | - | csv:101218942 | 1993.78 |