Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0210 ATGGATAATTACGGCTCTTCACCTTCGTATCCATACCACAATCCTTACGCATACCCTCGTCCAGTTGCTCCTCAATACCCACCTCCTTCTCAATATCCTCCTCCTTCTCAATATCCTCCTCCTCCTCATTATACACATCCAAATTCAGATCCCTATGCTCGTCCTGCTTACCCTTATCCCTATAATCCTTCACATGCCTCTCCATTTGCATATCCCCCACCCCCATCTCATTCTGGCCTAGTAGAGTATTTTCCACACCCACCTCCACATTCTAGCCCTCTACCTTACCCATATCCTTACTCTGATGCCTCATCTACTGGTGGTGCTAGGCCATCCATTCAATATCATAACAATTTCCAACCTGGTTCATCCCCATATCGGTATCAAGAATCTAATACATACCCTCCACCAGAAAGTCAATACCCACCACCCCCTTCACGAGTAAATAGCTTCTCTGGCCACTACAGGAACGATAGCACTGATTCTGCATCATCTGTCTCTTCTGCATACCCGCCTCTGGATGACCTTTTGTGCAATGTACATTTGTCTGATCATCAACCAACTGCTCCTGCATCACCCCCTGCACCTGCACCTGCACCTGCACCTGCACAGCCTTCAGCTTCGTTATTGGCAAATTCACCTCAAAGTGCGAGATATGATCGGCGTGACCGATTTTATGGCTTTCCGAATTCATCCTTTTCTAGTTTTGACACGGGGAATTCAGATCAAATGGTTACATCCAAACAACCTTCATTTTCCCATTCAAGCTCATTCAGTGGGTCTCAACATAGTCAGAACTTGCAGATTGTTCCCTTGCATAGTAAAGCATCATTGAGAGTTTTGCTATTGCATGGAAACTTAGAAATATGGGTTAATGAGGCCAAAAATCTTCCAAATATGGACATGTTTCACAAAACCTTAGGGGATATGTTTGCAAAATTACCTGGGAACATGAGCAACAAAATTGAAGGACGCGTGAGTCATAAGATCACTAGTGATCCTTATGTATCGATCAATGTAGCAAATGCAGTAATTGGGAGGACTTTTGTTATAAGCAACAATGAAAATCCTGTATGGAGGCAACATTTCTATGTTCCCGTTGCACATTATGCTGCTGAAGTAGTTTTTGTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTGATAGGAACGGTAGCAATTCCTGCAGAACAAATATATTCAGGGTCTATGGTTGAGGGAACCTTCCCAATCCTACTTGGTGGGAAGCCATGTAAACCTGGAGCAGCTCTAAGTATTTCTATTCAGTATACCCCAATGGAGAGGCTTAGCACTTATCATCATGGAGTGGGAGCTGGCCCTGATTATCAGGGGGTTCCTGATACATATTTCCCCCTCAGAAAGGGTGGAGCTGTCACTCTTTATCAAGATGCCCATGTTCCAGATGGGCACCTTCCAAATTTGATGCTTGATAATGGTATGTACTATGTACATGGGAAGTGTTGGCATGACATCTTTGATGCTGTACGTCAGGCTCGCAGGTTAATTTACATAACTGGGTGGTCGGTGTGGCACAAAGTGAAACTAGTTCGAGATACTAGCTATGGGACAGAGTGTACCCTTGGAGATCTGCTGAGGTCAAAGTCCCAGGAGGGAGTGAGAGTTTTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACTGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAACACTCCTCTGTACAAGTGATACTTTGTCCTCGGATTGCTGGAAAACGACATAGTTGGGTTAAGCAAAAGGAAGTTGGAACTATATATACACACCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAGATCATAGCTTTTGTTGGAGGGCTTGATTTATGTGATGGGCGGTATGATACTCCATTACATCCCATATTTCGGACCCTTCAAACAGTACACAAGGATGATTACCACAATCCTACATACACGGGTAGCGTTGTTGGTTGTCCAAGAGAACCATGGCATGATCTACACAGCAAAATTGATGGTCCAGCTGCATATGATGTTTTGACTAACTTTGAGGAGCGATGGAGGAGAGCTTCAAAACCTCACGGGATAAAGAAGTTGAAATCATATGATGATGCTTTGCTGAGTATTGAAAGAATTCATGACATAATTGGAATTTCTGAAGCGCACTGCACTAATGAAAATGACCCTGAATCATGGCATGTCCAGATTTTTCGCTCAATTGATTCAACTTCTGTTAAAGATTTCCCAAAGGATCCAAAAGATGCCCCAAGCAAGAACCTCGTATGTGGAAAGAATGTGCTGATTGATATGAGTATACACACAGCATATGTGAAAGCCATTCGAGCTGCCCAACATTACATTTATATAGAGAACCAATATTTCATTGGATCATCCTTCAATTGGAATTCTAATAAAGATATAGGTGCCAACAATTTGATTCCGATGGAAATTGCGCTAAAGATTGCTGATAAAATAAGAGCAAATGAGAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCTGAGGGTGTTCCAACCGCTGCTGCCACTCAGAGAATACTATTTTGGCAGCAAAAAACCATGCAAATGATGTATGAGGTCGTTTACAAGGCTTTGATGGAGGTTGGTCTTGAGGATGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGTCTGGGAAATCGTGAGGCTATGGATGGAAATGATCCTTCATGTTCTGGAAGTCCTAATGCAGAAAACACCCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGATATATGTTCACTCCAAAGGCATGATAGTTGACGACGAGTATGTGATTTTGGGATCTGCCAACATCAACCAGAGATCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGAGCCTATCAACCTCATTATACGTGGGCAAGGAAACTTTCTCATCCTCGTGGACAGATCTATGGATATAGGATGTCATTGTGGGCGGAGCATACGGGAACTACCGAGGAGTGTTTCAACCACCCGGAGAGCCTGGAATGTGTCAAAAGAGTTAGAACAATGGGAGAATTAAACTGGAAACAGTTTGCTGCAGATGATGTAACAGAGATGAAAGGACACCTACTGAAGTACCCCGTCGAAGTCGATAGAAGAGGAAGAGTAAGATCACTTCCTGGTCATGAAAATTTTCCAGATGTAGGAGGAAAAATAGTTGGTTCATTTCTTGGCATTCAGGAGAACCTCACTATATAA 3291 43.0 MDNYGSSPSYPYHNPYAYPRPVAPQYPPPSQYPPPSQYPPPPHYTHPNSDPYARPAYPYPYNPSHASPFAYPPPPSHSGLVEYFPHPPPHSSPLPYPYPYSDASSTGGARPSIQYHNNFQPGSSPYRYQESNTYPPPESQYPPPPSRVNSFSGHYRNDSTDSASSVSSAYPPLDDLLCNVHLSDHQPTAPASPPAPAPAPAPAQPSASLLANSPQSARYDRRDRFYGFPNSSFSSFDTGNSDQMVTSKQPSFSHSSSFSGSQHSQNLQIVPLHSKASLRVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMFAKLPGNMSNKIEGRVSHKITSDPYVSINVANAVIGRTFVISNNENPVWRQHFYVPVAHYAAEVVFVVKDSDVVGSQLIGTVAIPAEQIYSGSMVEGTFPILLGGKPCKPGAALSISIQYTPMERLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGMYYVHGKCWHDIFDAVRQARRLIYITGWSVWHKVKLVRDTSYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRIAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPLHPIFRTLQTVHKDDYHNPTYTGSVVGCPREPWHDLHSKIDGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLSIERIHDIIGISEAHCTNENDPESWHVQIFRSIDSTSVKDFPKDPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDIGANNLIPMEIALKIADKIRANERFAAYIVIPMWPEGVPTAAATQRILFWQQKTMQMMYEVVYKALMEVGLEDAFSPQDYLNFFCLGNREAMDGNDPSCSGSPNAENTPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSHPRGQIYGYRMSLWAEHTGTTEECFNHPESLECVKRVRTMGELNWKQFAADDVTEMKGHLLKYPVEVDRRGRVRSLPGHENFPDVGGKIVGSFLGIQENLTI 1096
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3908553 3918153 + CaPI482276_06g002100.1 Cam06g0210 128510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0210 1096 Pfam C2 domain 285 410 IPR000008 -
Cam06g0210 1096 Gene3D Endonuclease Chain A 756 992 - -
Cam06g0210 1096 SMART C2_3c 286 408 IPR000008 -
Cam06g0210 1096 SMART pld_4 609 644 IPR001736 GO:0003824(InterPro)
Cam06g0210 1096 SMART pld_4 942 969 IPR001736 GO:0003824(InterPro)
Cam06g0210 1096 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 283 432 IPR035892 -
Cam06g0210 1096 MobiDBLite consensus disorder prediction 189 203 - -
Cam06g0210 1096 MobiDBLite consensus disorder prediction 237 260 - -
Cam06g0210 1096 FunFam Phospholipase D delta 485 722 - -
Cam06g0210 1096 MobiDBLite consensus disorder prediction 105 135 - -
Cam06g0210 1096 MobiDBLite consensus disorder prediction 94 168 - -
Cam06g0210 1096 FunFam Phospholipase D 756 988 - -
Cam06g0210 1096 ProSiteProfiles C2 domain profile. 263 409 IPR000008 -
Cam06g0210 1096 MobiDBLite consensus disorder prediction 183 216 - -
Cam06g0210 1096 SUPERFAMILY Phospholipase D/nuclease 747 1028 - -
Cam06g0210 1096 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 942 969 IPR001736 GO:0003824(InterPro)
Cam06g0210 1096 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 609 644 IPR001736 GO:0003824(InterPro)
Cam06g0210 1096 MobiDBLite consensus disorder prediction 21 59 - -
Cam06g0210 1096 CDD C2_plant_PLD 280 431 - -
Cam06g0210 1096 Gene3D C2 domain 280 423 IPR035892 -
Cam06g0210 1096 Pfam Phospholipase D C terminal 1016 1086 IPR024632 -
Cam06g0210 1096 PANTHER PHOSPHOLIPASE D 282 1084 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cam06g0210 1096 Pfam Phospholipase D Active site motif 944 969 IPR001736 GO:0003824(InterPro)
Cam06g0210 1096 Pfam Phospholipase D Active site motif 611 644 IPR001736 GO:0003824(InterPro)
Cam06g0210 1096 MobiDBLite consensus disorder prediction 145 168 - -
Cam06g0210 1096 Gene3D Endonuclease Chain A 487 723 - -
Cam06g0210 1096 SUPERFAMILY Phospholipase D/nuclease 450 709 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2111 Cam-Chr1:34080221 Cam06g0210 Cam-Chr6:3908553 4.20E-262 dispersed
Cam06g0210 Cam-Chr6:3908553 Cam10g0340 Cam-Chr10:5529311 0.00E+00 dispersed
Cam06g0210 Cam-Chr6:3908553 Cam08g1871 Cam-Chr8:24724885 5.70E-271 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0210 K01115 - csv:101218942 1993.78