Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0212 ATGGCCGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTCCGCCCACCCATCTCCCTATCAATGACTCTGTCTCCTCTCGAATCGACCTTCTTTCCCTTCCTCCTAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCCCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAATCTGTCTCATCTCTCCCGCCCAAGAGACCGTCTACCAAGGATCGCCACACCAAGGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCCACCTGTGCCGCGCGTATCTTCCAGTTGACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACTATTCGGTGGCTTCTCGAGCGGGCCGAGCCGGCTATCATCGCCGCTACTGGGACTGGTACCATTCCCGCTATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCTGCCGATCCATCCGCGGCTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTACGTTGACGTAAACGACGCCCTCTCCGTCTCCGTCTCCGCCTCGAACGGCGTCGTTCAGGCCGGTACCGTTGCCGGTTCCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGGGCCATCCCATCCAACGCCATAATTCCCGGGGCGGTTTTCATGGTACCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTCCGGCTCCGGCGGCGCCGCTCATCAACACGACGGCGCGGCCCATTTCTACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAGCCCCACCAATCAAAGCTCCAGCACTTCAAGCTCCTCCGCTTCCAAGTCTCAATCTGTCATGGCGCCGATCTCGAGCTCTACCGTTCCAACGTCCGGCAAAACGACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAAGAGCGTCAATTCATGTCTCGCTCGTCCTCAAAACATTGA 1029 57.05 MADIQKQELDDDDDSPPTHLPINDSVSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTTARPISTFPSKPDTSHIQSSPTNQSSSTSSSSASKSQSVMAPISSSTVPTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3923488 3924516 - CaPI482276_06g002120.1 Cam06g0212 128512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0212 342 MobiDBLite consensus disorder prediction 67 88 - -
Cam06g0212 342 MobiDBLite consensus disorder prediction 1 53 - -
Cam06g0212 342 MobiDBLite consensus disorder prediction 151 178 - -
Cam06g0212 342 MobiDBLite consensus disorder prediction 164 178 - -
Cam06g0212 342 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 53 294 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cam06g0212 342 Pfam TCP family transcription factor 76 172 IPR017887 -
Cam06g0212 342 MobiDBLite consensus disorder prediction 1 18 - -
Cam06g0212 342 MobiDBLite consensus disorder prediction 263 315 - -
Cam06g0212 342 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Cam06g0212 342 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2637 Cam-Chr5:33849672 Cam06g0212 Cam-Chr6:3923488 2.20E-27 dispersed
Cam06g0028 Cam-Chr6:2124844 Cam06g0212 Cam-Chr6:3923488 3.60E-28 dispersed
Cam06g0212 Cam-Chr6:3923488 Cam06g1770 Cam-Chr6:28886272 8.80E-29 dispersed
Cam05g0925 Cam-Chr5:8383632 Cam06g0212 Cam-Chr6:3923488 1.70E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52082 PF03634 TCP 6.50E-30 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0212 - - - 0.0