Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam06g0286 | ATGTCGTTGAGTAGCGAAATCGAAAGCCTTTGGGTTCTGGCTTTGGCTTCCAAATGCTCAGCTCTCACTAAACAAAACATCTTTTTCTCTCTACTTCTTCTCCTCCTAATTTGGTTTTTCCTTTCCATTTTCTATTGGGCCCATCCTGGCGGCCCAGCTTGGGGCCGCCGCCGCAATTCCTCCTCCTCCTCCTCCGCCACCATCCCTGGCCCAAGAGGCCTCCCCCTCATCGGCAGTATGAGCTTGATGACGGGTCTGGCCCACCAAAAGATCGCCGCCATGGCCAAATCTCTAGGAGCTACTCGTCTCATGGCTTTCTCACTCGCCAACACTCGCGTGATTGTCACATGCCACCCAGACGTAGCTAAAGACATCCTAAACAGTTCCGTCTTCGCTGACCGTCCGATCAAAGAATCAGCTTACTCTTTGATGTTCAATCGTGCCATTGGATTTGCTCCTTACGGACTTTACTGGCGAACGCTCCGACGAATCGCTTCACACCATCTCTTCTGCCCTAAACAAATCAAATCCTCTGAATCACAACGCCGCCAAATCGCTTCCCAAATGGTCAAAATCTTGTCTTCCACTGCCGCCACCTCATCCTCTCTCCACATTCGTCAAACTCTTAAAACCGCCTCTTTGAATAGCATGATGGGTTCGGTTTTCGGCCGGTTTTACAATCTCTCCGACTCTAATCCTGAAGTCCAACTCCTCCAAAGCCTTGTGGATGAAGGGTATGATTTACTAGGCCTTCTTAACTGGTCCGACCATCTTCCCTTTTTGGCTGATTTCGACCCACAAAAAATCCGGTTCAGATGCTCCCGGTTGGTTCCACAGGTGAACCGCTTCGTCACCCGGATCATCAACCAACATCGGCAAAATTCATCCCAACAAACCATGGATTTCGTCCATGTTCTTCTCTCTCTTCAACAAAACGACAACCTCTCTGACTCCGATATCATCTCCGTTCTTTGGGAAATGATATTTAGAGGAACAGACACGGTAGCGGTTTTAATCGAGTGGATTCTAGCGAGGATGGTGGTTCACAAGGAGGAGCAACAAAAAATACAAGAGGAATTAGATAAGGTGGTTGGGAGATCACGTGCCGTCGTGGAATCCGACATTCCGTCGTTGGTTTATTTAACGGCGGTGGTTAAGGAAGTTCTAAGGTTGCATCCACCCGGCCCACTTCTATCTTGGGCTCGTCTTGCTATTACTGATACAATCGTGGATGGTCATCACGTGCCTCGTGGGACCACTGCCATGGTTAACATGTGGTCGATAGCGCGGGACCCACAGATCTGGTCGGACCCACTTGAATTTATTCCTGAGAGGTTTCTCTCTGGTGGTGCTGACTTGGAGTTTTCGATTATGGGTTCGGATCTACGACTAGCTCCATTCGGGTCGGGTCGGAGGACTTGTCCTGGGAAGGCACTTGCTTGGACAACTGTCACGTTTTGGGTGGCTACGCTATTACATGAATTTAAATGGTTGCCTTCTCCTGATCAAAACGACGTTGTCGACTTCTCTGAGGTTCTTAAGCTCTCTTGTGAGATGGCTAATCCACTCACGGTTAAACTATGCCCAAGGCGCACTTAA | 1599 | 49.22 | MSLSSEIESLWVLALASKCSALTKQNIFFSLLLLLLIWFFLSIFYWAHPGGPAWGRRRNSSSSSSATIPGPRGLPLIGSMSLMTGLAHQKIAAMAKSLGATRLMAFSLANTRVIVTCHPDVAKDILNSSVFADRPIKESAYSLMFNRAIGFAPYGLYWRTLRRIASHHLFCPKQIKSSESQRRQIASQMVKILSSTAATSSSLHIRQTLKTASLNSMMGSVFGRFYNLSDSNPEVQLLQSLVDEGYDLLGLLNWSDHLPFLADFDPQKIRFRCSRLVPQVNRFVTRIINQHRQNSSQQTMDFVHVLLSLQQNDNLSDSDIISVLWEMIFRGTDTVAVLIEWILARMVVHKEEQQKIQEELDKVVGRSRAVVESDIPSLVYLTAVVKEVLRLHPPGPLLSWARLAITDTIVDGHHVPRGTTAMVNMWSIARDPQIWSDPLEFIPERFLSGGADLEFSIMGSDLRLAPFGSGRRTCPGKALAWTTVTFWVATLLHEFKWLPSPDQNDVVDFSEVLKLSCEMANPLTVKLCPRRT | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 4884092 | 4885774 | + | CaPI482276_06g002860.1 | Cam06g0286 | 128586 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam06g0286 | 532 | PANTHER | CYTOCHROME P450 78A7-RELATED | 5 | 526 | IPR051996 | - | |
| Cam06g0286 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 467 | 476 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam06g0286 | 532 | CDD | CYP78 | 99 | 523 | - | - | |
| Cam06g0286 | 532 | FunFam | Cytochrome P450 78A5 | 60 | 530 | - | - | |
| Cam06g0286 | 532 | PRINTS | P450 superfamily signature | 465 | 474 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | P450 superfamily signature | 474 | 485 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | P450 superfamily signature | 330 | 347 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | P450 superfamily signature | 383 | 394 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | Pfam | Cytochrome P450 | 69 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | E-class P450 group I signature | 424 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | E-class P450 group I signature | 474 | 497 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | E-class P450 group I signature | 319 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | E-class P450 group I signature | 339 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | E-class P450 group I signature | 212 | 230 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | E-class P450 group I signature | 382 | 400 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | PRINTS | E-class P450 group I signature | 464 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | SUPERFAMILY | Cytochrome P450 | 68 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0286 | 532 | Gene3D | Cytochrome P450 | 54 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g0286 | Cam-Chr6:4884092 | Cam11g1399 | Cam-Chr11:26648301 | 2.60E-128 | dispersed | |
| Cam06g0286 | Cam-Chr6:4884092 | Cam08g1500 | Cam-Chr8:21210568 | 1.60E-133 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam06g0286 | K20619 | - | csv:101216159 | 914.064 |