Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam06g0355 | ATGGCTTCTTTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTTTTCCTCTTCTTTTCTCTGCCATCTCTCTCCTTCTCCATCTCGAAAGATGAAGCTTCGTATCTCACTCATCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTACGTAGCCCTTCAAGCTTGGAAACTGGCCATTTATTCTGACCCTCAAAACATGACAGCCAATTGGGTTGGCGCCGATGTATGTTCTTACACCGGCATCTACTGTGCTACGGCGCTTGACGACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCGGAAATTGGCCTTATCACCGATTTGGCGCTCTTCCATATTAACTCTAATAGGTTTTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTTCGGTATAATGACTTCGAAGGAGAAGTCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGACACCATCGGAAACTCAACTGTCTCTGTTGTCTCTTTTGCCAACAATGAGTTCCATGGTTGCATTCCCAGCACTATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTCGACGGCTGTTTCCCACCCGAGATAGGAAACCTCGTCAATCTTACGGTCTTCGATGCCAGCGCCAATGGCTTCATTGGGCATCTGCCCGAAACCTTATCTGGCCTCCAAAATTTGGAGATCATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCCTTTGCAAGTTGCCCAAATTGGCTAACTTCACTTTCTCCTTTAATTATTTTGATGGCGAAGATGCAACGTGTGTTGGAACTAAGGGATCAGAGAAACTCTTCGATGATGCTCAAAATTGTTTGGCGAATCAACCGGAGCAGAAAGATGCAAACAAATGTAGCGTTGTCCTAAAGAAATCTGTGGATTGTGGAAACTGTAGTGGTGGTGGTTCAGGTTCTCCCGGAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAATGACCTCTCCACCAGAATCGATCGACACCTCGGTCCCAGAAGTGGAGACTCCTTCTGCCCCATCATTGTCACCAACCTCTGCTCCGTTCTCACCACCTAACCTTGAAACCCCCAATCCATCCCCAGTTGACTCTCTTGAACCACCAGTTCACTCACCACCACCCCCAGTCCATTCTCCACCACCACCGGTCCATTCTCCTCCACCACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCCACTCCCCACCACCCCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCATTCCCCACCTCCTCCTGTTCATTCCCCACCTCCTCCTGTTCATTCTCCACCTCCACCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCACCACCACCGGTCCACTCCCCACCACCACCGGTCCACTCCCCACCTCCACCAGTCCACTCCCCACCACCCCCACCAGTTCATTCTCCACCTCCTCCGGTCCACTCTCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCACCACCCCCTGTCCACTCTCCACCACCCCCGGTCCACTCCCCACCCCCACCAGTTTACTCCCCACCTCCACCAGTCCACTCTCCACCACCACCGGTACACTCCCCACCCCCACCGGTTCATTCCCCACCCCCACCGGTTCATTCTCCACCGCCACCGGTCTACTCCCCACCGCCACCTGTCCATTCTCCACCACCACCTGTTTACTCCCCACCGCCACCAGTTCAATCTCCACCACCTCCAACTGCATCTTCTCCTCCTCCTCCTCCCGATTCTTCTCCACCGCCAACATTCGAGGACGTCATCCTCCCACCAAATATCGGCTTCCAATACACATCACCACCTCCACCACAGTTTCCTGGCTATTAA | 2205 | 52.47 | MASFHRKQANHACFLLLFLFFSLPSLSFSISKDEASYLTHRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCATALDDSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEVPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFIGNKLDGCFPPEIGNLVNLTVFDASANGFIGHLPETLSGLQNLEIMDVSNNELRGSVPGGLCKLPKLANFTFSFNYFDGEDATCVGTKGSEKLFDDAQNCLANQPEQKDANKCSVVLKKSVDCGNCSGGGSGSPGVPMTPEDPFDQSPSPRYRSPPPPMTSPPESIDTSVPEVETPSAPSLSPTSAPFSPPNLETPNPSPVDSLEPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVQSPPPPTASSPPPPPDSSPPPTFEDVILPPNIGFQYTSPPPPQFPGY | 734 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5672638 | 5674842 | - | CaPI482276_06g003550.1 | Cam06g0355 | 128655 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam06g0355 | 734 | PRINTS | Proline rich extensin signature | 414 | 426 | - | - | |
Cam06g0355 | 734 | PRINTS | Proline rich extensin signature | 471 | 488 | - | - | |
Cam06g0355 | 734 | PRINTS | Proline rich extensin signature | 451 | 467 | - | - | |
Cam06g0355 | 734 | PRINTS | Proline rich extensin signature | 426 | 447 | - | - | |
Cam06g0355 | 734 | PRINTS | Proline rich extensin signature | 489 | 514 | - | - | |
Cam06g0355 | 734 | MobiDBLite | consensus disorder prediction | 396 | 734 | - | - | |
Cam06g0355 | 734 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 13 | 731 | IPR051582 | - | |
Cam06g0355 | 734 | SUPERFAMILY | L domain-like | 83 | 351 | - | - | |
Cam06g0355 | 734 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 254 | 348 | - | - | |
Cam06g0355 | 734 | Gene3D | Ribonuclease Inhibitor | 244 | 385 | IPR032675 | - | |
Cam06g0355 | 734 | MobiDBLite | consensus disorder prediction | 409 | 432 | - | - | |
Cam06g0355 | 734 | FunFam | Leucine-rich repeat extensin-like protein 1 | 75 | 236 | - | - | |
Cam06g0355 | 734 | MobiDBLite | consensus disorder prediction | 433 | 450 | - | - | |
Cam06g0355 | 734 | Pfam | Leucine Rich Repeat | 310 | 332 | IPR001611 | GO:0005515(InterPro) | |
Cam06g0355 | 734 | Gene3D | Ribonuclease Inhibitor | 73 | 243 | IPR032675 | - | |
Cam06g0355 | 734 | MobiDBLite | consensus disorder prediction | 451 | 713 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g2147 | Cam-Chr5:29892904 | Cam06g0355 | Cam-Chr6:5672638 | 3.60E-37 | dispersed | |
Cam06g0355 | Cam-Chr6:5672638 | Cam06g0358 | Cam-Chr6:5694669 | 6.30E-08 | dispersed | |
Cam06g0355 | Cam-Chr6:5672638 | Cam06g0356 | Cam-Chr6:5683352 | 6.30E-08 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam06g0355 | - | - | - | 0.0 |