Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0355 ATGGCTTCTTTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTTTTCCTCTTCTTTTCTCTGCCATCTCTCTCCTTCTCCATCTCGAAAGATGAAGCTTCGTATCTCACTCATCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTACGTAGCCCTTCAAGCTTGGAAACTGGCCATTTATTCTGACCCTCAAAACATGACAGCCAATTGGGTTGGCGCCGATGTATGTTCTTACACCGGCATCTACTGTGCTACGGCGCTTGACGACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCGGAAATTGGCCTTATCACCGATTTGGCGCTCTTCCATATTAACTCTAATAGGTTTTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTTCGGTATAATGACTTCGAAGGAGAAGTCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGACACCATCGGAAACTCAACTGTCTCTGTTGTCTCTTTTGCCAACAATGAGTTCCATGGTTGCATTCCCAGCACTATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTCGACGGCTGTTTCCCACCCGAGATAGGAAACCTCGTCAATCTTACGGTCTTCGATGCCAGCGCCAATGGCTTCATTGGGCATCTGCCCGAAACCTTATCTGGCCTCCAAAATTTGGAGATCATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCCTTTGCAAGTTGCCCAAATTGGCTAACTTCACTTTCTCCTTTAATTATTTTGATGGCGAAGATGCAACGTGTGTTGGAACTAAGGGATCAGAGAAACTCTTCGATGATGCTCAAAATTGTTTGGCGAATCAACCGGAGCAGAAAGATGCAAACAAATGTAGCGTTGTCCTAAAGAAATCTGTGGATTGTGGAAACTGTAGTGGTGGTGGTTCAGGTTCTCCCGGAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAATGACCTCTCCACCAGAATCGATCGACACCTCGGTCCCAGAAGTGGAGACTCCTTCTGCCCCATCATTGTCACCAACCTCTGCTCCGTTCTCACCACCTAACCTTGAAACCCCCAATCCATCCCCAGTTGACTCTCTTGAACCACCAGTTCACTCACCACCACCCCCAGTCCATTCTCCACCACCACCGGTCCATTCTCCTCCACCACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCCACTCCCCACCACCCCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCATTCCCCACCTCCTCCTGTTCATTCCCCACCTCCTCCTGTTCATTCTCCACCTCCACCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCACCACCACCGGTCCACTCCCCACCACCACCGGTCCACTCCCCACCTCCACCAGTCCACTCCCCACCACCCCCACCAGTTCATTCTCCACCTCCTCCGGTCCACTCTCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCCACTCCCCACCACCCCCTGTCCACTCTCCACCACCCCCGGTCCACTCCCCACCCCCACCAGTTTACTCCCCACCTCCACCAGTCCACTCTCCACCACCACCGGTACACTCCCCACCCCCACCGGTTCATTCCCCACCCCCACCGGTTCATTCTCCACCGCCACCGGTCTACTCCCCACCGCCACCTGTCCATTCTCCACCACCACCTGTTTACTCCCCACCGCCACCAGTTCAATCTCCACCACCTCCAACTGCATCTTCTCCTCCTCCTCCTCCCGATTCTTCTCCACCGCCAACATTCGAGGACGTCATCCTCCCACCAAATATCGGCTTCCAATACACATCACCACCTCCACCACAGTTTCCTGGCTATTAA 2205 52.47 MASFHRKQANHACFLLLFLFFSLPSLSFSISKDEASYLTHRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCATALDDSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEVPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFIGNKLDGCFPPEIGNLVNLTVFDASANGFIGHLPETLSGLQNLEIMDVSNNELRGSVPGGLCKLPKLANFTFSFNYFDGEDATCVGTKGSEKLFDDAQNCLANQPEQKDANKCSVVLKKSVDCGNCSGGGSGSPGVPMTPEDPFDQSPSPRYRSPPPPMTSPPESIDTSVPEVETPSAPSLSPTSAPFSPPNLETPNPSPVDSLEPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVQSPPPPTASSPPPPPDSSPPPTFEDVILPPNIGFQYTSPPPPQFPGY 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5672638 5674842 - CaPI482276_06g003550.1 Cam06g0355 128655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0355 734 PRINTS Proline rich extensin signature 414 426 - -
Cam06g0355 734 PRINTS Proline rich extensin signature 471 488 - -
Cam06g0355 734 PRINTS Proline rich extensin signature 451 467 - -
Cam06g0355 734 PRINTS Proline rich extensin signature 426 447 - -
Cam06g0355 734 PRINTS Proline rich extensin signature 489 514 - -
Cam06g0355 734 MobiDBLite consensus disorder prediction 396 734 - -
Cam06g0355 734 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 731 IPR051582 -
Cam06g0355 734 SUPERFAMILY L domain-like 83 351 - -
Cam06g0355 734 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 254 348 - -
Cam06g0355 734 Gene3D Ribonuclease Inhibitor 244 385 IPR032675 -
Cam06g0355 734 MobiDBLite consensus disorder prediction 409 432 - -
Cam06g0355 734 FunFam Leucine-rich repeat extensin-like protein 1 75 236 - -
Cam06g0355 734 MobiDBLite consensus disorder prediction 433 450 - -
Cam06g0355 734 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515(InterPro)
Cam06g0355 734 Gene3D Ribonuclease Inhibitor 73 243 IPR032675 -
Cam06g0355 734 MobiDBLite consensus disorder prediction 451 713 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2147 Cam-Chr5:29892904 Cam06g0355 Cam-Chr6:5672638 3.60E-37 dispersed
Cam06g0355 Cam-Chr6:5672638 Cam06g0358 Cam-Chr6:5694669 6.30E-08 dispersed
Cam06g0355 Cam-Chr6:5672638 Cam06g0356 Cam-Chr6:5683352 6.30E-08 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0355 - - - 0.0