Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0359 ATGGCTTCTCTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTCTTCCTCTTCTTGTCTCTGCCATCTCTCTCCGTCTCCATCTCAGAAGCCGAAGCTTCGTATCTCACTCGTCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTATGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACAACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTCAGGTATAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGATACCATCGGAAACTCAACCGTCTCCGTTGTCTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACCATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTTGGCGGCTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTCGATGCGAGCGCCAATGGCTTCGTCGGCCAGCTGCCCGAAACCTTATCGGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAGCAAACTTCACTTTCTCGTTTAATTATTTTGACGGCAAAGATGCAGCGTGTGTTGGAACTAAGGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCAACCGGAGCAAAAAGATGCAAACAAATGTAGCGTTGTCCTAAAGAAATCAGTGGACTGTGGAAACTGTGGTGGTGGTGGTTCAGGTTCTCCCGAAGTGCCAATGACTCCTGAAGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTGAATCGATCGTATCACCAGTTCATTCACCACCACATCCCGTTCATTCACCACCACCCCCAGTCCATTCCCCACCACCACCAATTCATTCCCCACCACCTCCTATTAACTCGCCTCCACCACCGGTCCATTCTCCTCCACCGCCAGTCCACTCCCCTCCACCTCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCTCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCTCCTGTTCACTCCCCACCACCACCTGTGTACTCTCCACCACCACCTCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCGGTCCACTCCCCACCTCCTCCTATCTACTCTCCACCTCCACCGGTCCACTCCCCACCTCCACCAGTCCACTCCCCACCTCCACCGGTCCACTCTCCACCGCCACCGATCTACTCCCCACCACCCCCGGTCCATTCTCCACCAACTCCTGTTTACTCCCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGGATCTCCTCCTCCTCCTCCTCCCGATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCCCCAAATATCGGCTTCCAATATGCATCACCACCTCCACCACAATTCCCTGGCTACTGA 2076 51.93 MASLHRKQANHACFLLLFLFLSLPSLSVSISEAEASYLTRRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCTTALDNSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVFDASANGFVGQLPETLSGLQNLEIMDVSNNELRGSVPGGFCKLPKLANFTFSFNYFDGKDAACVGTKGSEKLFDDAQNCLANQPEQKDANKCSVVLKKSVDCGNCGGGGSGSPEVPMTPEDPFDQSPSPRYRSPPPPVTSPPESIVSPVHSPPHPVHSPPPPVHSPPPPIHSPPPPINSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVHSPPPPVYSPPPPPVHSPPPPVSSPPPPVHSPPPPVYSPPPPPVHSPPPPVYSPPPPPVHSPPPPVSSPPPPVHSPPPPVYSPPPPVHSPPPPIYSPPPPVHSPPPPVHSPPPPVHSPPPPIYSPPPPVHSPPTPVYSPPPPVQSPPPPTGSPPPPPPDSSPPPSFEDIILPPNIGFQYASPPPPQFPGY 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5698386 5700461 + CaPI482276_06g003590.1 Cam06g0359 128659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0359 691 Gene3D Ribonuclease Inhibitor 237 353 IPR032675 -
Cam06g0359 691 MobiDBLite consensus disorder prediction 409 670 - -
Cam06g0359 691 FunFam Leucine-rich repeat extensin-like protein 1 75 236 - -
Cam06g0359 691 FunFam Leucine-rich repeat receptor protein kinase EMS1 237 327 - -
Cam06g0359 691 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 531 IPR051582 -
Cam06g0359 691 SUPERFAMILY L domain-like 83 348 - -
Cam06g0359 691 Gene3D Ribonuclease Inhibitor 72 236 IPR032675 -
Cam06g0359 691 PRINTS Proline rich extensin signature 402 418 - -
Cam06g0359 691 PRINTS Proline rich extensin signature 437 458 - -
Cam06g0359 691 PRINTS Proline rich extensin signature 458 474 - -
Cam06g0359 691 PRINTS Proline rich extensin signature 475 492 - -
Cam06g0359 691 Pfam Leucine Rich Repeat 310 332 IPR001611 GO:0005515(InterPro)
Cam06g0359 691 MobiDBLite consensus disorder prediction 397 691 - -
Cam06g0359 691 Pfam Leucine rich repeat N-terminal domain 77 110 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0357 Cam-Chr6:5687103 Cam06g0359 Cam-Chr6:5698386 3.10E-06 dispersed
Cam06g0359 Cam-Chr6:5698386 Cam06g1139 Cam-Chr6:21748379 1.10E-38 dispersed
Cam06g0358 Cam-Chr6:5694669 Cam06g0359 Cam-Chr6:5698386 7.50E-09 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0359 - - - 0.0