Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam06g0359 | ATGGCTTCTCTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTCTTCCTCTTCTTGTCTCTGCCATCTCTCTCCGTCTCCATCTCAGAAGCCGAAGCTTCGTATCTCACTCGTCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTATGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACAACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTCGATGTCAGCAACAACCGCTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTCAGGTATAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGATACCATCGGAAACTCAACCGTCTCCGTTGTCTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACCATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATCGGCAACAAGCTTGGCGGCTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTCGATGCGAGCGCCAATGGCTTCGTCGGCCAGCTGCCCGAAACCTTATCGGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAGCAAACTTCACTTTCTCGTTTAATTATTTTGACGGCAAAGATGCAGCGTGTGTTGGAACTAAGGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCAACCGGAGCAAAAAGATGCAAACAAATGTAGCGTTGTCCTAAAGAAATCAGTGGACTGTGGAAACTGTGGTGGTGGTGGTTCAGGTTCTCCCGAAGTGCCAATGACTCCTGAAGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTGAATCGATCGTATCACCAGTTCATTCACCACCACATCCCGTTCATTCACCACCACCCCCAGTCCATTCCCCACCACCACCAATTCATTCCCCACCACCTCCTATTAACTCGCCTCCACCACCGGTCCATTCTCCTCCACCGCCAGTCCACTCCCCTCCACCTCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCTCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCTCCTGTTCACTCCCCACCACCACCTGTGTACTCTCCACCACCACCTCCTGTTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCGGTCCACTCCCCACCTCCTCCTATCTACTCTCCACCTCCACCGGTCCACTCCCCACCTCCACCAGTCCACTCCCCACCTCCACCGGTCCACTCTCCACCGCCACCGATCTACTCCCCACCACCCCCGGTCCATTCTCCACCAACTCCTGTTTACTCCCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGGATCTCCTCCTCCTCCTCCTCCCGATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCCCCAAATATCGGCTTCCAATATGCATCACCACCTCCACCACAATTCCCTGGCTACTGA | 2076 | 51.93 | MASLHRKQANHACFLLLFLFLSLPSLSVSISEAEASYLTRRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCTTALDNSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVFDASANGFVGQLPETLSGLQNLEIMDVSNNELRGSVPGGFCKLPKLANFTFSFNYFDGKDAACVGTKGSEKLFDDAQNCLANQPEQKDANKCSVVLKKSVDCGNCGGGGSGSPEVPMTPEDPFDQSPSPRYRSPPPPVTSPPESIVSPVHSPPHPVHSPPPPVHSPPPPIHSPPPPINSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVHSPPPPVYSPPPPPVHSPPPPVSSPPPPVHSPPPPVYSPPPPPVHSPPPPVYSPPPPPVHSPPPPVSSPPPPVHSPPPPVYSPPPPVHSPPPPIYSPPPPVHSPPPPVHSPPPPVHSPPPPIYSPPPPVHSPPTPVYSPPPPVQSPPPPTGSPPPPPPDSSPPPSFEDIILPPNIGFQYASPPPPQFPGY | 691 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 5698386 | 5700461 | + | CaPI482276_06g003590.1 | Cam06g0359 | 128659 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam06g0359 | 691 | Gene3D | Ribonuclease Inhibitor | 237 | 353 | IPR032675 | - | |
Cam06g0359 | 691 | MobiDBLite | consensus disorder prediction | 409 | 670 | - | - | |
Cam06g0359 | 691 | FunFam | Leucine-rich repeat extensin-like protein 1 | 75 | 236 | - | - | |
Cam06g0359 | 691 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 237 | 327 | - | - | |
Cam06g0359 | 691 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 13 | 531 | IPR051582 | - | |
Cam06g0359 | 691 | SUPERFAMILY | L domain-like | 83 | 348 | - | - | |
Cam06g0359 | 691 | Gene3D | Ribonuclease Inhibitor | 72 | 236 | IPR032675 | - | |
Cam06g0359 | 691 | PRINTS | Proline rich extensin signature | 402 | 418 | - | - | |
Cam06g0359 | 691 | PRINTS | Proline rich extensin signature | 437 | 458 | - | - | |
Cam06g0359 | 691 | PRINTS | Proline rich extensin signature | 458 | 474 | - | - | |
Cam06g0359 | 691 | PRINTS | Proline rich extensin signature | 475 | 492 | - | - | |
Cam06g0359 | 691 | Pfam | Leucine Rich Repeat | 310 | 332 | IPR001611 | GO:0005515(InterPro) | |
Cam06g0359 | 691 | MobiDBLite | consensus disorder prediction | 397 | 691 | - | - | |
Cam06g0359 | 691 | Pfam | Leucine rich repeat N-terminal domain | 77 | 110 | IPR013210 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam06g0357 | Cam-Chr6:5687103 | Cam06g0359 | Cam-Chr6:5698386 | 3.10E-06 | dispersed | |
Cam06g0359 | Cam-Chr6:5698386 | Cam06g1139 | Cam-Chr6:21748379 | 1.10E-38 | dispersed | |
Cam06g0358 | Cam-Chr6:5694669 | Cam06g0359 | Cam-Chr6:5698386 | 7.50E-09 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam06g0359 | - | - | - | 0.0 |