Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0369 ATGTCTAAAGAAGAAGATCCAAAAGCTAACAGAAGGACAACCCGGTCCTCTTCAGCAGCTGTTCTAAGGGATTCTGGTGAAATAAAGAAGAAATGTGATCCACATATTCCAACTCTTAATGATCTTGTTTTCGGAGAACATACCATTAGTAAGGAAGATCTCCTGTCTAGTTTTCCTGGACGTCATACTCAAATTCTTGAACTCCTTAACCTCTTAGGTCCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGCACGTCGGCAGGAAAAACCAGTGTCATTCTACAAATATTTCGTCATCTCAACCGTCCTTTTGTCTACTCAAGCTGTCGTACTTGTTATAGTTTGCGAACTCTGTTTGAGTGTATCTTGAATCAGTTATTACTTCATCAGAAAGATGCAGATAATGGATATTTGAGTGCAAAACGCTGTGAAAAACCATCAGACTTTGTTAACTTTCTTCGTGAAGCCTTAGTTAAAGTTGTAAAAACTCTCCAGGGGAACCCAGGAAAGTTAGGCACCAAGAAGTTGACAGGACAAGAGCATGGGCATATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAGCATATTGCCTTTTCTATTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCAGACACATACTATTCAAATATGGGTTACTTGGAGCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGATGATCTTCGTAAAATTTTTATGAGGAATCAAACCAATCAAGAGATGTATTCTTCCTTTCTGAGTGTTGTATTGGGGCCATTCTATAGAATTACTAGACAAGTGAATGAGCTATCCTTAACGCTTTCATCATTGTACAAAACATACTGTGAAGCTTCAGATGATCTGAACAATGTTCCCAACGAGTCCAGCAAGAGGACACGTTTCAGTCATTTTCAGCCACATATAGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCCACTTTCTGAGGTTAATAATTTGAAGGAAGCAAAGAGAAAAGGTGGTAGTATGAAGTTTAGCGGGTGTGACTCTTCTGAGCACTTGGATTTTCACATGTCTACTTCAGCAAAATATCTTCTTCTTTCAGCCTTCCTTGCTTCAAGAAACCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCACTAGTAGTCGTAAAAAGAGGAAGAGGCCATCTGAAAAATCAATTGAGCAGAAGGAAATTTCAGAACAGGAGTTGCTTATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTGGCAGAAATCTCCCTTGAAGATGAGCAAGGAAATGTTTTAATGGAAAGTCAAAATGAGGATAGCGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAACTTTGTGGTTAAAGGAGGAAGTTGCCCACTAGAAGGTTCAACTCGATATCGCTCTACAGTGTCTGAAGATATGGCTTTGAAGGTGGCAAGGAGTATTAAGTTCCCCCTGTCCAAGTGCCAAGAGCATGTAGCATCAACGACTTATTTGCTGGACTCGATAGCACAGCAGTGGCTCAATGATGAGCTTGAGAGAAGAAATGGACTGGATCTAATACACGAAGAAGAGAAAAACAGAAAATTATTGATGATGGTTAGTTACCAGCTATTGCTGTATGGCTTCAAAAACAGCAGAGATAAGAAAAGGAAAACTGTGAGATTATTTTAG 1803 39.77 MSKEEDPKANRRTTRSSSAAVLRDSGEIKKKCDPHIPTLNDLVFGEHTISKEDLLSSFPGRHTQILELLNLLGPLNSPMLPLFVYGGTSAGKTSVILQIFRHLNRPFVYSSCRTCYSLRTLFECILNQLLLHQKDADNGYLSAKRCEKPSDFVNFLREALVKVVKTLQGNPGKLGTKKLTGQEHGHMIYLIFDNLELVRDWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDTYYSNMGYLEPIPVYFSEYTEDDLRKIFMRNQTNQEMYSSFLSVVLGPFYRITRQVNELSLTLSSLYKTYCEASDDLNNVPNESSKRTRFSHFQPHIAPALNQIFKISSPLSEVNNLKEAKRKGGSMKFSGCDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGTSSRKKRKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAEISLEDEQGNVLMESQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARSIKFPLSKCQEHVASTTYLLDSIAQQWLNDELERRNGLDLIHEEEKNRKLLMMVSYQLLLYGFKNSRDKKRKTVRLF 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5781508 5788916 + CaPI482276_06g003690.1 Cam06g0369 128669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0369 600 MobiDBLite consensus disorder prediction 1 21 - -
Cam06g0369 600 Pfam AAA ATPase domain 58 217 IPR041664 -
Cam06g0369 600 Pfam ORC5, lid domain 272 320 IPR048866 -
Cam06g0369 600 MobiDBLite consensus disorder prediction 400 424 - -
Cam06g0369 600 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 50 531 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Cam06g0369 600 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 376 531 IPR047088 -
Cam06g0369 600 FunFam Origin of replication complex subunit 5 58 239 - -
Cam06g0369 600 MobiDBLite consensus disorder prediction 408 424 - -
Cam06g0369 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 265 IPR027417 -
Cam06g0369 600 Gene3D - 58 238 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0369 K02607 - csv:101223023 947.577