Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam06g0370 | ATGGACGTGGGATTCGCGTTAGTTATAGTAACGGCAGTAACGGCGTATCTTCTTTGGTTTACTTTCATTTCACGGTCGTTAAAAGGTCCTCAAATGTGGCCGTTACTCGGCAGCCTCCCCGGGTTGGTAGAAAATTGCGACCGTCTACACGACTGGATCTCCGACAACCTCCGCGCGTGTGGCGGCACGTATCAAACCTGCATCTGGGCTTTCCCTTTCTTCGCTAAAAAGCAAGGCCTCGTAACTGTCACGTGTGACCCGAGAAATCTGGAACATATTCTCAAGACCCGATTCGATAATTACCCTAAAGGCCCCACTTGGCAAGCAGTTTTTCACGAGTTACTTGGACAAGGCATTTTTAACTCCGACGGTGACACCTGGCTTTTCCAGAGAAAAACTGCTGCTTTGGAATTTACTACTAGAACCCTTCGTCAAGCCATGGCTCGATGGGTTAGCCGAGCTATTAAGTTGAGGTTTTGCCCTATCCTTAAACAAGCCCAGCTCAATTCTCAACCCATTGATCTTCAGGATCTGTTGTTACGTCTTACTTTTGATAATATTTGTGGCTTGGCTTTTGGTAAAGATCCCATGACTTGCGCGCCGGGTTTCCCCGAAAATGGCTTTGCTATGGCTTTCGATCGAGCTACCGAGGCTTCCTTGCAACGCTTTATTCTACCGGAAGTGCTTTGGAAATTCAAAAAGTGGCTTCGGCTTGGAATGGAAGTCAGCTTGAGCCGGAGCTTAGTCCATATTGAGGAGTATTTATCCAGTGTGATTGATTCACGTAAGCTCGAGTTGCTTAATCAGCCTAAAGACTCCACCTCACATGATGATTTGTTGTCACGTTTCATGAAGAAAAAGGATGGTAATTACTCCAACGCGTTCCTCCGCCACGTCGCGCTTAATTTCATCCTAGCTGGACGGGACACGTCATCCGTTGCGCTGAGCTGGTTTTTCTGGTTGGTAACTTTAAACCCGCTCATTGAAGAAAAAATACTCCGCGAGATCTGCACCGTTCTGATTGAGACACGTGGAAATAACATCCAATCATGGCTCGAGGAACCGTTAGGATTCGAAGAGGTCGACCGTCTGATTTATCTCAAAGCCGCTCTCACCGAAACCCTAAGATTGTACCCGTCAGTGCCGGAGGATTCAAAGCACGTCGTCGCCGACGACGTTCTGCCGGATGGAACCTTCGTTCCGGCGGGATCGTCAGTGACTTATTCCATCTATTCCACCGGAAGAATGAAGTCGACGTGGGGAGAAGACTGCCTGGAATTCCGGCCGGAGCGGTGGTTGACGGCGGACGGAAAGAAATTCATACCGTACGATCCGTACAAATTCGTAGCGTTCAATGCAGGGCCGAGGATCTGCTTAGGGAAGGATTTGGCGTATTTACAGATGAAGTCGATAGCGGCGGCGGTGCTACTTCGGCACCGGCTGACGGTGGCGGCGGGGCATAAGGTGGAGCAAAAAATGTCGTTGACGCTGTTTATGAAGTACGGGCTGAAGGTGAACGTTCACCGGAGGGATTTGGAGGGAATTGTGGAAAGTATCAGGGGCAAATACGGAAATTGGCAAGGGAAAGATGCTCCGTTAGTCGCCGTTGTGAACTGCAACGGCGGGTGTAACGGATTTAACGAAGTACCATGCTAA | 1656 | 49.34 | MDVGFALVIVTAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLVENCDRLHDWISDNLRACGGTYQTCIWAFPFFAKKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKQAQLNSQPIDLQDLLLRLTFDNICGLAFGKDPMTCAPGFPENGFAMAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNQPKDSTSHDDLLSRFMKKKDGNYSNAFLRHVALNFILAGRDTSSVALSWFFWLVTLNPLIEEKILREICTVLIETRGNNIQSWLEEPLGFEEVDRLIYLKAALTETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLTADGKKFIPYDPYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNVHRRDLEGIVESIRGKYGNWQGKDAPLVAVVNCNGGCNGFNEVPC | 551 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 5797109 | 5798764 | + | CaPI482276_06g003700.1 | Cam06g0370 | 128670 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam06g0370 | 551 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PRINTS | P450 superfamily signature | 306 | 323 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | Pfam | Cytochrome P450 | 28 | 496 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PANTHER | CYTOCHROME P450 | 18 | 503 | - | - | |
| Cam06g0370 | 551 | Gene3D | Cytochrome P450 | 24 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PRINTS | E-class P450 group I signature | 315 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PRINTS | E-class P450 group I signature | 295 | 312 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam06g0370 | 551 | FunFam | Cytochrome P450 | 21 | 513 | - | - | |
| Cam06g0370 | 551 | SUPERFAMILY | Cytochrome P450 | 21 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam06g0370 | 551 | CDD | CYP86A | 67 | 503 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g0370 | Cam-Chr6:5797109 | Cam10g1476 | Cam-Chr10:28467277 | 1.80E-124 | dispersed | |
| Cam03g0085 | Cam-Chr3:1822214 | Cam06g0370 | Cam-Chr6:5797109 | 1.50E-194 | transposed | |
| Cam11g0930 | Cam-Chr11:14600981 | Cam06g0370 | Cam-Chr6:5797109 | 2.10E-101 | transposed | |
| Cam01g0260 | Cam-Chr1:2909385 | Cam06g0370 | Cam-Chr6:5797109 | 6.40E-228 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam06g0370 | K15398 | - | csv:101221526 | 1079.7 |