Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0408 ATGTGGGAGCCCTCCTTGGTAGTGTGGACATTTTTCATTCTTACATTGTTGTCCATTACTTTCCTTTCAAAAATACTTAAAAATGGAAAGTACATTGGCCAAGATGATCAAAGTCAGAGGAGATACAAATTTCCTCCAGGGAGAAGAAGCTGGCCTGTTATAGGTGATAGCTTCCATTGGTACTCTGCCATTGCAAGTTCTCATCCTTCCAAGTATGTTGAAGAACAGGCCAAAAGATACGGGAAGATCTTCTCGTGTCGTGTTTTTGGAAAATGCACAGTAGTATCGATCGATCCAGAATTTAATAGGTATGTGATGCAAAACGAAGGAACGTTGTTTCAATCAAGTTATCCCAAATCTTTCCGAGATTTGGTAGGCCTCAATGGTGTCATCACAGTCCAAGGGGAACAACAAAGGAAACTCCACGCAATTGCTTCCAATTTTATGCGTATAAACAAACTCAACTTTAGCTTCCTAAAAGATATTCAAACCATAATTATCCATTCCTTGACCACTTTCCATGACGGTCATCATCAAGTCATATCTCTCCAAGATGCTTGCAGGAAGATTGCCATTAATCTAATGGTAAGTCAACTATTGGGTGTATCAAGTGAATCTGAAGTGAATGAAATTAGTCAGTTATTTTACGACTTCGTGGATGGCTGTCTATCTATTCCTATCAACTTGCCTGGCTTTGCCTATTACAATGCAATGAAGGCAAGGAAGCAAATCATAAGCAAAATTAAGAAGAAAATAAAGATGCACAAATCAGGCGTAGCAAAGGAAACGAGCGGGCAGGAAGTGCTTGCAAGACTATTAGAAGAACAAAAGTACTTATCGGATGAGGCAGTTGAAGATTTCATTATCAATCTTCTTTTTGCTGGAAACGAAACCACTTCTAAAACGATGCTTTTCGCAGTCTATTACCTAACCCACTCACCAAAAGCAATGAAGCAACTCCTGGATGAACAAGATGCTTTAAGAAATGAGTATGGAGATAATACAATCACATGGCAGGATTACAAATCAATGCCCTTTACCCAGTGTGTTATTGATGAGACGCTTCGACTCGGAGGAATTGCAATTTGGTTGATGAGGGAGACAAAAGAAGAGATCAAATACTCAGATTACGTGATTCCAAAGGGAACCTTTGTTGTTCCATTTCTTTGTGCTGTCCATTTGGACGAGAATATATATGATGGAGCTTTAACTTTTAACCCTTGGAGATGGATGGAGCTTAAAAATCAGGAAATGAGAAATTGGAGGAATAGCCCATTCTTTGCTCCATTTGGAGGAGGTGGTAGGTTGTGTCCGGGAGCAGAATTGGCCCGTCTCCAAATTGCTTTATTTCTCCACCACTTTGTTACCAAGTACAGGTGGACACAAATTAAAGCAGATAGAATGTCTTTCTTTCCCTCTGCTCGGCTAGTCAACGGCTTCCAAATTCGCTTGGAAAAATGGGAACACTGA 1470 40.07 MWEPSLVVWTFFILTLLSITFLSKILKNGKYIGQDDQSQRRYKFPPGRRSWPVIGDSFHWYSAIASSHPSKYVEEQAKRYGKIFSCRVFGKCTVVSIDPEFNRYVMQNEGTLFQSSYPKSFRDLVGLNGVITVQGEQQRKLHAIASNFMRINKLNFSFLKDIQTIIIHSLTTFHDGHHQVISLQDACRKIAINLMVSQLLGVSSESEVNEISQLFYDFVDGCLSIPINLPGFAYYNAMKARKQIISKIKKKIKMHKSGVAKETSGQEVLARLLEEQKYLSDEAVEDFIINLLFAGNETTSKTMLFAVYYLTHSPKAMKQLLDEQDALRNEYGDNTITWQDYKSMPFTQCVIDETLRLGGIAIWLMRETKEEIKYSDYVIPKGTFVVPFLCAVHLDENIYDGALTFNPWRWMELKNQEMRNWRNSPFFAPFGGGGRLCPGAELARLQIALFLHHFVTKYRWTQIKADRMSFFPSARLVNGFQIRLEKWEH 489
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 6173624 6183103 + CaPI482276_06g004080.1 Cam06g0408 128708
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0408 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam06g0408 489 PANTHER CYTOCHROME P450 26 43 458 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cam06g0408 489 CDD CYP90-like 78 486 - -
Cam06g0408 489 PRINTS E-class P450 group IV signature 344 360 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS E-class P450 group IV signature 393 411 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS E-class P450 group IV signature 71 94 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS E-class P450 group IV signature 285 311 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS E-class P450 group IV signature 377 391 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS E-class P450 group IV signature 421 437 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS E-class P450 group IV signature 437 455 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 Gene3D Cytochrome P450 34 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 SUPERFAMILY Cytochrome P450 39 485 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam06g0408 489 Pfam Cytochrome P450 45 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0408 Cam-Chr6:6173624 Cam07g0940 Cam-Chr7:23101027 3.70E-81 dispersed
Cam06g0408 Cam-Chr6:6173624 Cam09g0053 Cam-Chr9:1453267 2.40E-80 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0408 - - - 0.0