Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0416 ATGTTAGAGGAAAAAGAAATGGCTCCTGATCTAAACACGACACTTTCCAAGAAGACGTTTGTTTTTGGTATGAAGGTATGGGTGTTTACTGGGATCCTGGTTGGGGTGTTTATTGTAATAGTCCTTGTAGTGCTATCAATATGTGTTACTTCACGAAGAAAATCTAGAAGGGTAAGTGGCATGCTTCCTCTCAACCGTATTTCCATTGCATCAAAGGAAATCAAGGAGATTGGAGTGGATCATGTTACACCAATCCAACAGGGTTCCCTCCCCCACGATGGATTCGACACAGAATCAGAAAAAGTTCTTCTATATTCAAACAAGGCATACAATTACAGCATATCAGGCTCAGTTGATCACACAGAGATATATGCTATTGGCTCTGGAGAAGGGAGCAAGGAAGCAAGTGTTTTGCAAAGACCCTCAGATTCAATACCATCGAATCCTTCGCCACTGGCTGGTCTGCCAGAATTCTCACAACTGGGATGGGGTCACTGGTTCACCTTAAGAGACCTGGAACTTGCAACAATGCATTTTTCAAACGATAATATAATTGGGGAGGGAGGATATGGAGTTGTTTATCGAGGTCATCTTATCAATGGGACACCTGTAGCTGTCAAAAAGCTTTTAAGTTTAGGACAAGCGGAAAGGGAATTCAGAGTGGAAGTAGAAGCATTTGGGCATGTGCGGCATAAGAACTTAGTACGGCTCCTGGGATACTGCATTGAAGGAACGCACAGGATACTAGTATATGAGTACGTGGATAATGGAAATCTAGAGCAGTGGCTTCACGGAGCTCTATGTCAGCATGGATATCTCACTTGGGAAGCAAGAATCAAAATTCTCCTTGGTACTGCCAAGGCACTGGCATATTTGCATGAGGCAATCGAGCCAAAAATCGTCCATCGAGATATCAAGGCAAGCAACATATTGATTGATGATGAGTTTAATGCAAAGCTATCAGACTTTGGGCTGGCCAAATTACTCGGTGCTGGGAAGAGCCACATTACCACCAGAGTTATGGGTACGTTTGGATATGTGGCACCAGAATATGCCAAATCTGGGCTTCTAAATGAGAAGAGCGATGTTTATAGTTTTGGAGTGGTACTTTTGGAAGCAATTACTGGAAGAGACCCTGTTGATTATGGTCGCCCAACACATGAGGTAAATTTGGTAGATTGGCTAAAGATGATGGTAGGGAGCAAACGGTCAGAAGAGGTGGTAGATCCAAATATAGAGAGAAAGCCATCAATTAGTGAACTGAAGCGAGTTCTTTTGACTGCTTTGAGGTGTGTGGATCCAGATGCTGATAAGAGGCCTAAGATGAGCCAAGTTTCCCGCATGCTCGAGTCTGAAGAATATCCAATTCCTCGACAGGACCGGAGACCCAGAAAAAGCAATGCCATTGCGACCAAAATGGAGACTGAGAAACAGGAAAGAGGACCCAGACGACACAGATAA 1461 43.74 MLEEKEMAPDLNTTLSKKTFVFGMKVWVFTGILVGVFIVIVLVVLSICVTSRRKSRRVSGMLPLNRISIASKEIKEIGVDHVTPIQQGSLPHDGFDTESEKVLLYSNKAYNYSISGSVDHTEIYAIGSGEGSKEASVLQRPSDSIPSNPSPLAGLPEFSQLGWGHWFTLRDLELATMHFSNDNIIGEGGYGVVYRGHLINGTPVAVKKLLSLGQAEREFRVEVEAFGHVRHKNLVRLLGYCIEGTHRILVYEYVDNGNLEQWLHGALCQHGYLTWEARIKILLGTAKALAYLHEAIEPKIVHRDIKASNILIDDEFNAKLSDFGLAKLLGAGKSHITTRVMGTFGYVAPEYAKSGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSKRSEEVVDPNIERKPSISELKRVLLTALRCVDPDADKRPKMSQVSRMLESEEYPIPRQDRRPRKSNAIATKMETEKQERGPRRHR 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6284928 6287710 + CaPI482276_06g004160.1 Cam06g0416 128716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0416 486 FunFam Putative receptor-like serine/threonine-protein kinase 254 465 - -
Cam06g0416 486 MobiDBLite consensus disorder prediction 453 486 - -
Cam06g0416 486 ProSitePatterns Protein kinases ATP-binding region signature. 185 208 IPR017441 GO:0005524(InterPro)
Cam06g0416 486 CDD STKc_IRAK 185 450 - -
Cam06g0416 486 ProSiteProfiles Protein kinase domain profile. 179 455 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0416 486 MobiDBLite consensus disorder prediction 436 486 - -
Cam06g0416 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g0416 486 Gene3D Transferase(Phosphotransferase) domain 1 254 463 - -
Cam06g0416 486 FunFam serine/threonine-protein kinase PBS1-like 155 253 - -
Cam06g0416 486 SUPERFAMILY Protein kinase-like (PK-like) 163 460 IPR011009 -
Cam06g0416 486 SMART serkin_6 179 449 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0416 486 Pfam Protein kinase domain 181 446 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0416 486 PANTHER OS01G0323000 PROTEIN 7 476 IPR052232 -
Cam06g0416 486 Gene3D Phosphorylase Kinase; domain 1 159 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1906 Cam-Chr2:32123309 Cam06g0416 Cam-Chr6:6284928 1.50E-145 dispersed
Cam06g0416 Cam-Chr6:6284928 Cam09g2283 Cam-Chr9:37299108 1.90E-154 dispersed
Cam02g1528 Cam-Chr2:28264937 Cam06g0416 Cam-Chr6:6284928 1.70E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85244 PF00069 Pkinase 4.40E-48 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0416 - - - 0.0