Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0457 ATGGCATTTTGGTGGACTCTGCTTGTTCTTGGATTTGCTTACGCGATCTGTAGGTTACTTTTGATGCTTATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGACGTTATGGACGATGGGAATCAGACGCAGGAGAATAGCTACATCTACATTCCACCTAGGGTAAAGACACAACAGCAAGACAAGAGAGTCCAGTGTTACGAGCCTGCAACTATGAAATACCTGGGCTATTTTCCTGCATTGTCACGAGATGAGGTCAAGGAGCGTGTTGCTTCAGCCAGGAAAGCGCAGAAAGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATACTTTTGAAGTACATTATTGAACATCAAGAGCTCATTTGCGAGATCTCCTCCCGTGAAACTGGAAAAACAATAGTGGATGCTAATATGGGAGAAGTAATGGCGACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGAAGGGCAACACTTCACAAGAAAGCCCGAGTAGAATTTCATCCCCTTGGAGTTATTGGGGCGATAGTCCCATGGAACTATCCATTCCATAACATTTTCAATCCAGTGCTTGCAGCAGTCTTTGCAGGAAACGGCATTGTAGTTAAGGTTTCAGAACATGCAAGTTGGTCAGGATGCTTTTATATCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCTGAGAGTTTGGTTGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCGCTAGTGTCTTCAGTAGACAAAATGATATTCGTTGGATCTACTGGTGTGGGTAGGATGATAATGAAAACTGCTGCTGAGACACTTATTCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCATTTATCGTGTGTGAGGATGTAGATCTGGATCATGTGGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCGTTAGCTGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTTGTAAATGATGCCTTAGACAGAGGGGCTAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGTGCCGTTGATCAATATTTCCCGCCTACCGTTATTGTTGATGTCAACCATACAATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCTATAATGAAATTCACCACAGATGATGAGGCCGTGAATCTTGCAAATGATTCAAGGTTTGGGCTTGGTTGTGCTGTCTTCTCTGGCAGTCAGCGGCGTGCCAAGAACATTGCTTCGCAGATACATACTGGAAGTGTTGCAATTAATGACTTTGCCACAAATTATTTGTGCCAGTCCTTGCCATTTGGTGGTGTAAAAGAGAGTGGATTCGGTCGATTTGCGGGCGTTGAAGGATTACGAGCTTGTTGTCTTGTTAAAGCAGTTGTTGAGGATAGGTGGTGGCCATACATTCAGACCAAGCATCCGAAGCCTCTTACGTATCCTGTTGCAGACAACGCCTTTGAGTTTCAGATGTCACTTGTCGAAGCAACGTATGGGCTGAACATATGGGATCGATTAAGAGCATTGGTCAATGTTCTGAAGATGCTGTCCGAGCAGAACACTCCGTCCAAAGACAACTCTACCATTGATGATGAAAGTAAGAGAGCTGATTGA 1812 44.15 MAFWWTLLVLGFAYAICRLLLMLIPPNVPSIEVDASDVMDDGNQTQENSYIYIPPRVKTQQQDKRVQCYEPATMKYLGYFPALSRDEVKERVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRETGKTIVDANMGEVMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKVSEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKTAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFTTDDEAVNLANDSRFGLGCAVFSGSQRRAKNIASQIHTGSVAINDFATNYLCQSLPFGGVKESGFGRFAGVEGLRACCLVKAVVEDRWWPYIQTKHPKPLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEQNTPSKDNSTIDDESKRAD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6693669 6702285 + CaPI482276_06g004570.1 Cam06g0457 128757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0457 603 FunFam aldehyde dehydrogenase 22A1 65 317 - -
Cam06g0457 603 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491(InterPro)
Cam06g0457 603 FunFam Aldehyde dehydrogenase A 301 495 - -
Cam06g0457 603 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491(InterPro)
Cam06g0457 603 CDD ALDH_F15-22 69 531 - -
Cam06g0457 603 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 55 528 - -
Cam06g0457 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620(InterPro)
Cam06g0457 603 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491(InterPro)
Cam06g0457 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1764 Cam-Chr2:30774757 Cam06g0457 Cam-Chr6:6693669 6.90E-46 dispersed
Cam06g0457 Cam-Chr6:6693669 Cam06g1817 Cam-Chr6:29227162 2.70E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0457 - - - 0.0