Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0487 ATGGTGCTTTTCCCGGAAGTCATTGAAGAAATGGTAAGAAATATGTCGATAAAGAAAAAGAATAATGAAGATGATGGCGGTAAAGAAGGGGGTCGAGAAGTAATGAGTAAAGAGGGAAAAGGAAAAAAATCCATGATTTGTTTATCTGGAAGTGTTAAAACCACCAAGTTCGATGATATGGCTTCTGTTTGCTCCAAGAGAGGAAATAAAGGAATTAATCAGGATTCTCTCGTTGTTTGGGAGGATTATGGCAACCGAGGAGATGTAGTTTTATGTGGAATGTTTGATGGGCATGGGCCTTGGGGCCACATGATTAGCAAACAAGTCAGAAAGTCACTACCTTCTCAATTACTTACAAATTGGCAACAAAACCTTTCCATGCAAACCGACCAAAACCATCTCTTTCCTTTCAACCTATGGAAGCAATCTTGCTTAAAAACTTATGCCGCCATTGATGAAGAGCTCAAGCAACACCCTCGCATTGATTCTTTTTACAGTGGCACCACCGCTTTAACCCTCGTTAAACAGGGGCGACACCTTGTTGTTGCAAATGCTGGCGATTCACGAGCTGTGTTGGCGGTAACTTCTGGTGATGGCTGCTTGAAACCAATTCAACTCTCCGTTGATTTCCGACCTAATTTGCCTGAGGAAGCTGAAAGAATAAAACAATCGAAAGGGAGAGTGGTATGTTTAAAAGATGAACCTGGGGTTTATAGGGTGTGGACTCCCGATTCAGGGACTCCAGGATTGGCAATTTCTAGAGCATTTGGCGATTATTGCACCAAACAGTACGGTCTCATTTCTGTGCCTGATGTAAGCCATCGAATCATCACTACTTCAGATCAATTTGTCATTGTCGCCACCGATGGGGTATGGGACGTCATGTCGAATCAAGAAGCGGTTCACATAGTTTCTTCAACACCAAATAGGGAAATGTCGGCCAAAAGGCTAGTGGATTGTGCTGCACGTGCATGGAAATCAAAGAAACGAGGATCATTTACGCCATTGTTTGAGCTTCTGATTCGCGCGGGCAGTGCCATATCGTTTCGCTCTCAAATTCGCTCATCTCTAAGCCATTCCCCTTCGCATCGCATCCTAATCCGAAGGAACTTCGAGATGAGTCCGATTTTGAATGAAGCAGAACCGAAGGAACTGCGAGATAAGTCTGATATTGAAGCAATCTTCTCCGACGGCGATTATATTTCTGTTTTTGGCGTTGAATCTCTCCTCTCAGAACCAAAGGAGCTGCGAGATGAGTCCGATTTTGAAGCAATCTTCTCCGACGGCGATTATATTTCCGTTTGTGGCTTTGGATCTCTCCTCTCTGAGAGGAGTGCGCGAAGTACTTTTCCTGATTTGATCAACTTTAGAGTTGCGAGATTGAACGATTTCAGACGCGTTTTCGGAATTATAGCTCCTATATTCTTTGAGCACGGCATTGCTAAATCTGAAACCAAGGAGATTTCAAGCTTATTTGCGGAGCCTTGTGAAGGAGAAACTATCATCATTACGGTTTTCGAGATTAAGAAGTCTGAGATTCCAGCGTTCATACAGAGAGAGTTTGCGTTTCGATTTCTAGCTGTTCTTCCTGAAACATTAGACGGAAAGCTATATGATAAACCAGCGGTGCTTTGTTCTCGATCCACTGACGAGGAGTTTTTCCAAGTGAAATGCAAAGGAAACAAGGACATTTTTCTTCAGCATTATGGTCGTCATAATATTGTTAAGATCTGGAGAGATGATATCTTACCTTGTCGCGTCTATCTTCAACACTGTATTTTAGCTGCAAAAAACCTAGGTGACATTGCTTATAACAACTTTTTGGATCACACTTTCCTGGGAGATCGTGGTACAACCATCCATGAATATTTGGTTGCTGATGGTTCATCCATTATAGAAGAGGAGCCTCCAGAATCTCTCAAATTTCGATATGGCGGTGAAGAAGAAAAATGGGATTCGAATTGGGATTCGGATGGGAGGAGAAGAGTGTTGCGCTTAGAGAAGAGGGAAGTGATGCGTTTAGAGAAGAGGGAAGTGAAGGGCATTGCGTTTAGAGAAGAGGGAAGTGATGCGTTTAGAGAAGAGGGACGAGACGCGACACTGAGAGCTAGAGCGAGACCCGACGAGACCCAGCGAAAACGAGAGAGCTAG 2151 43.51 MVLFPEVIEEMVRNMSIKKKNNEDDGGKEGGREVMSKEGKGKKSMICLSGSVKTTKFDDMASVCSKRGNKGINQDSLVVWEDYGNRGDVVLCGMFDGHGPWGHMISKQVRKSLPSQLLTNWQQNLSMQTDQNHLFPFNLWKQSCLKTYAAIDEELKQHPRIDSFYSGTTALTLVKQGRHLVVANAGDSRAVLAVTSGDGCLKPIQLSVDFRPNLPEEAERIKQSKGRVVCLKDEPGVYRVWTPDSGTPGLAISRAFGDYCTKQYGLISVPDVSHRIITTSDQFVIVATDGVWDVMSNQEAVHIVSSTPNREMSAKRLVDCAARAWKSKKRGSFTPLFELLIRAGSAISFRSQIRSSLSHSPSHRILIRRNFEMSPILNEAEPKELRDKSDIEAIFSDGDYISVFGVESLLSEPKELRDESDFEAIFSDGDYISVCGFGSLLSERSARSTFPDLINFRVARLNDFRRVFGIIAPIFFEHGIAKSETKEISSLFAEPCEGETIIITVFEIKKSEIPAFIQREFAFRFLAVLPETLDGKLYDKPAVLCSRSTDEEFFQVKCKGNKDIFLQHYGRHNIVKIWRDDILPCRVYLQHCILAAKNLGDIAYNNFLDHTFLGDRGTTIHEYLVADGSSIIEEEPPESLKFRYGGEEEKWDSNWDSDGRRRVLRLEKREVMRLEKREVKGIAFREEGSDAFREEGRDATLRARARPDETQRKRES 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6979581 6991441 - CaPI482276_06g004870.1 Cam06g0487 128787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0487 716 Gene3D - 51 333 IPR036457 -
Cam06g0487 716 SMART PP2C_4 50 324 IPR001932 -
Cam06g0487 716 ProSiteProfiles PPM-type phosphatase domain profile. 60 340 IPR001932 -
Cam06g0487 716 MobiDBLite consensus disorder prediction 18 40 - -
Cam06g0487 716 Pfam Protein phosphatase 2C 86 322 IPR001932 -
Cam06g0487 716 MobiDBLite consensus disorder prediction 692 716 - -
Cam06g0487 716 SUPERFAMILY PP2C-like 60 325 IPR036457 -
Cam06g0487 716 PANTHER OS05G0358400 PROTEIN 414 646 - -
Cam06g0487 716 CDD PP2Cc 60 327 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1768 Cam-Chr3:32753353 Cam06g0487 Cam-Chr6:6979581 1.20E-95 dispersed
Cam06g0487 Cam-Chr6:6979581 Cam10g0353 Cam-Chr10:5720285 5.80E-83 dispersed
Cam06g0486 Cam-Chr6:6972723 Cam06g0487 Cam-Chr6:6979581 3.60E-114 tandem
Cam02g1581 Cam-Chr2:28721974 Cam06g0487 Cam-Chr6:6979581 6.20E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0487 - - - 0.0