Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0567 ATGGGTTGTATCCATACAAAATGTTGCTGTCGCTACCCAAAATCGTTGGTTGGAGAATCCCAAGACTTTCGACAAGAGGTTCCTTACTGTCTTCAAGATAAGAACACTGTGATAGAGAAATCATTGGAGTTGATTCCTGTTGCTTCGCACAACTATCATTTGGAATACTTGGTACTGGCTCAGCGTGGTTACTACCCTGAATCTCCTGATAAAGAAAACCAAGACAGTTTCTGCATTAGAACAAATATTCAAGGTAACCCAAATGCCCATTTCTTTGGTGTTTTTGATGGGCATGGTCAATTTGGAATGCAGTGTTCAAATTTTGTGAAGGATAGACTAATAGAAAAGCTATGTAATGATCCCACATTGTTAGATGATCCAGTACAAGCTTATAATTCAGCATTTTTGTCTACAAATGATGAGTTACATACAAGTGAGATTGATGATTCCATGAGTGGAACAACTGCAATTACAGTTCTTGTTGTTGGGGATACCCTTTATGTGGCTAATGTTGGGGATTCAAGAGCTGTAATTGCAGTTAAAGAAGGGGATAGTGTTCTTGCTAAGGACTTGTCTAATGATCAAACACCATTTAGAAAAGATGAGTATGAGAGAGTTAAGCTTTGTGGGGCTAGAGTTCTGAGTGTTGATCAAGTGGAAGGACTTGTGGATCCTGATATTCAATGCTGGGGCGATGAAGAAAGTCAGGGCGGCGATCCGCCTCGACTGTGGGTTCAAAATGGATTGTATCCTGGAACTGCGTTTACTAGGAGCATTGGTGATAGTACTGCAGAGAAGATTGGTGTAAATGCTGTTCCGGAGGTTTTAGTTCTTCAGCTTAACCCCAATCATCTTTTCTTTGTGGTTGCTAGTGATGGAGTTTTCGAGTTCCTTTCAAGTCAAACTGTTGTTGATATGGCATCGAGTTATGCAGATCCTCAAGATGCATGCACTGCCATTGCTGCCGAGTCGTATAAACTATGGATGGAACATGAAAATCGGACCGATGATATAACGATCATTGTTGTTCAAATCAAAGGCTTGTCTAATTCAGGTGCTGAGAATTCGTCCAGCACTGGGCTTGAGACTGCTTCTTTGAGAATCGATTTCTCGGATCTACCTACTGAACCGAACTCTCAACATGTTGATGTGACAAATCGGAACCCAGCAATCGAGCAGAAGAGACTTGTAATGCATACTGAAAGTTGA 1209 41.19 MGCIHTKCCCRYPKSLVGESQDFRQEVPYCLQDKNTVIEKSLELIPVASHNYHLEYLVLAQRGYYPESPDKENQDSFCIRTNIQGNPNAHFFGVFDGHGQFGMQCSNFVKDRLIEKLCNDPTLLDDPVQAYNSAFLSTNDELHTSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKEGDSVLAKDLSNDQTPFRKDEYERVKLCGARVLSVDQVEGLVDPDIQCWGDEESQGGDPPRLWVQNGLYPGTAFTRSIGDSTAEKIGVNAVPEVLVLQLNPNHLFFVVASDGVFEFLSSQTVVDMASSYADPQDACTAIAAESYKLWMEHENRTDDITIIVVQIKGLSNSGAENSSSTGLETASLRIDFSDLPTEPNSQHVDVTNRNPAIEQKRLVMHTES 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7742050 7744645 - CaPI482276_06g005670.1 Cam06g0567 128867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0567 402 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169(InterPro)
Cam06g0567 402 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Cam06g0567 402 SUPERFAMILY PP2C-like 48 347 IPR036457 -
Cam06g0567 402 SMART PP2C_4 56 343 IPR001932 -
Cam06g0567 402 Gene3D - 49 347 IPR036457 -
Cam06g0567 402 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Cam06g0567 402 Pfam Protein phosphatase 2C 72 323 IPR001932 -
Cam06g0567 402 CDD PP2Cc 71 345 IPR001932 -
Cam06g0567 402 PANTHER PROTEIN PHOSPHATASE 60 344 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0567 Cam-Chr6:7742050 Cam11g0973 Cam-Chr11:16193590 2.80E-26 dispersed
Cam05g0653 Cam-Chr5:5650384 Cam06g0567 Cam-Chr6:7742050 2.40E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0567 - - - 0.0