Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0579 ATGCAGGCCGATCAGAGAAGAAAGTCGTCTATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGACACTCACACTGGAGAGAAAGTTGCAATTAAGAAAATCAACGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTCCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATCGTGGAGATAAAGCACATCCTTCTACCTCCATCTAGAAGGGAATTCAAGGACATTTATGTTGTGTTTGAGCTCATGGAATCTGATCTACATCAAGTTATCAAAGCAAATGATGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGAGGCTTGAAATACATACACACAGCCAATGTCTTCCACCGGGACCTAAAACCCAAAAACATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCACGCGTTGCGTTTAATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGAGCTCCTGAACTCTGTGGTTCATTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGCTGCATCTTTGCGGAGCTTTTAACTGGAAAGCCACTTTTCCCTGGAAAGAATGTCGTCCACCAATTAGATTTGATGACTGATTTTCTGGGAACCCCGAATGCAGAAGCCATTGCCAGGGTACGAAATGAGAAAGCTCGGAGATACTTAAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTTCCTCATGCAGATCCACTTGCACTTCGCTTGTTGGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAGAGAGAGCCATCTGCTCAACCTGTTACTAAGATGGAATTTGAATTTGAGAGACGAAGGATAACCAAAGAAGATGTAAGGGAGCTTATTTACCGGGAGATTCTCGAGTATCATCCAAAGATGTTGAAGGAATTCTTAGATGGATCAGAACCCACTGGTTTCATGTATCCAAGTGCGGTCGACCATTTTAAGAAGCAATTTGCGTTCCTTGAGGAACACTATGGAAATGGTGCAACTGTCGCTCCTCCTGAAAGACAACATGCATCCTTGCCTAGGCCATGTGTTTTATATTCAGATAACATGGTGCAGAACTCGGCCCAAGTTGCAAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACAAGTGGATAGGACTTGCAATATTCCTTTGGCTAGAGTTCCTATTCAAGTTCCTCAATCTATTCAAGCAGGCAATGGTGCAAGGCCTGGAAAAGTTGTTGGCTCCGTGTTGCGATACAACAACTGCGGAGCAACAGCAGCAGCAGTAGCACCAGAAGTTCTTGAACAGCGGAGGATGACCAGAAACCCTTCCATTCCACCACAGTACGCTGCTAATAACTGTTCATATCCAAGAAGAAACTCATCCTGTAAAAATGAAAGAACTGATGATGAAGCCATTGAAGGTCCAAACGGTTTGCAGGCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGTGGACCAGGAAATAACTGGTACTGA 1704 43.08 MQADQRRKSSIDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLDGSEPTGFMYPSAVDHFKKQFAFLEEHYGNGATVAPPERQHASLPRPCVLYSDNMVQNSAQVANDLSKCSIKEVERPQVDRTCNIPLARVPIQVPQSIQAGNGARPGKVVGSVLRYNNCGATAAAVAPEVLEQRRMTRNPSIPPQYAANNCSYPRRNSSCKNERTDDEAIEGPNGLQAKPQYIARKVAAAQGGPGNNWY 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7831226 7836163 - CaPI482276_06g005790.1 Cam06g0579 128879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0579 567 FunFam Mitogen-activated protein kinase 15 119 - -
Cam06g0579 567 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0579 567 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0579 567 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0579 567 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Cam06g0579 567 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Cam06g0579 567 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0579 567 MobiDBLite consensus disorder prediction 521 542 - -
Cam06g0579 567 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Cam06g0579 567 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam06g0579 567 FunFam Mitogen-activated protein kinase 111 339 - -
Cam06g0579 567 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cam06g0579 567 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1098 Cam-Chr4:25137837 Cam06g0579 Cam-Chr6:7831226 4.60E-186 dispersed
Cam06g0579 Cam-Chr6:7831226 Cam06g1581 Cam-Chr6:27299321 1.70E-207 dispersed
Cam06g0579 Cam-Chr6:7831226 Cam02g1903 Cam-Chr2:32077271 1.40E-212 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85248 PF00069 Pkinase 5.30E-68 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0579 - - - 0.0