Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0590 ATGGACAATCGCCACCATTCCATTCACTCGGATTCTGAATCGATCAAATTCCACAAGAAACTCGAAAATTTTCCTGGGGTAGGAAAAGAACGAACTTATAGAACTTGGATTCTTCGGTTTTCTACTATGGAAATGGATCGTGATGATTTGAGTGTTCGATTATCTGCTCTATGGAACATCATTGGTCTAAAGAGAAGCCTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGCTCTGTTGGAGCTGCCCATAACAAAGATCAATTGAAGAAATTGAATATCACTCACATTTTAACCATTGCTTGTTCTTTGCCACCTGCTGATCCAAATGATTTTGTATGTAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAACACTTTGATGATTGTTTCAATTTTATCGATGAGGGAAGACAATCTGGTGGAGGGGTCTTGATTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATTACAGTTGCCTATCTGATGAAAAAGCGTGGTATGAATCTAACTCAAGCATTGGAACACGTCAAGAGTAGACGACCGCAGGCAGCTCCAAATGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCCCTTCAAGATGATCAGATGAAACTGTCAAATGTTTTGAGTTCTAAGCAGCTGCTGGTAACTTCCTTTAACAACAGAATCAGGGGGAGAAAGAGTGGACAATCAGACAACAATTGA 744 39.92 MDNRHHSIHSDSESIKFHKKLENFPGVGKERTYRTWILRFSTMEMDRDDLSVRLSALWNIIGLKRSLKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTIACSLPPADPNDFVCKVVGVLDTRDADIKQHFDDCFNFIDEGRQSGGGVLIHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRPQAAPNVGFMVQLKDFETALQDDQMKLSNVLSSKQLLVTSFNNRIRGRKSGQSDNN 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8010229 8014703 - CaPI482276_06g005900.1 Cam06g0590 128890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0590 247 Gene3D Protein tyrosine phosphatase superfamily 66 220 IPR029021 -
Cam06g0590 247 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 73 212 IPR029021 -
Cam06g0590 247 ProSiteProfiles Dual specificity protein phosphatase domain profile. 72 213 IPR020422 GO:0006470(InterPro)
Cam06g0590 247 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 134 192 IPR000387 GO:0016311(InterPro)
Cam06g0590 247 FunFam Dual specificity phosphatase 12 74 227 - -
Cam06g0590 247 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 52 211 - GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER)
Cam06g0590 247 SMART dsp_5 72 210 IPR020422 GO:0006470(InterPro)
Cam06g0590 247 CDD DSP 73 206 - -
Cam06g0590 247 Pfam Dual specificity phosphatase, catalytic domain 80 209 IPR000340 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0590 Cam-Chr6:8010229 Cam10g1316 Cam-Chr10:26643443 3.40E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0590 - - - 0.0