Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0599 ATGCAAGATTTCTTCGGATCTGTTCGTCGATCCTTAGTATTTCTAGCTCCCGACGGTGACGACGGTGGGAGGTTCGGTGGCCTTGTCGAGAAGATCGGCTCTAGCATCCGTAAATCTCGAAATGGACTGTTTTCTAAACAGTCACTGCGGGCTCTGCCTCCGGTTGCGAAGGAAGATGCACCTCCGATTTGGTGGCGGAAGGGAGAGTTGATCGGATGTGGTGCTTTTGGTCGAGTTTATATGGGGATGAATCTCGATTCTGGAGAGCTTCTTGCAGTCAAACAAGTCTCAATTGCGGCTAATAGTGCTTCAAGGGAGAAAGCCCAAGCTCACATACGGGAGCTGGAGGAGGAAGTGAGGCTTTTGAAGAATCTTTCTCACCCCAATATTGTGAGATATCTGGGAACTGCAAGAGAAGAAGATTCATTAAATATTCTATTGGAGTTTGTTCCTGGAGGATCAATATCTTCTTTGTTAGGGAAATTTGGGTCTTTCCCCGAGTCTGTTATAAAGACCTACACTAAGCAGCTATTATTGGGCCTTGAGTACCTTCATAAGAACGGCATCATGCATAGGGATATAAAGGGTGCAAATATTCTTGTAGACAATAAGGGGTGTATTAAACTTGCAGATTTTGGTGCATCCAAGAAAGTGGTTGAGCTGGCAACTATAAATGGGGCCAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGACATAGCTTCTCTGCTGATATATGGAGTGTGGGGTGTACTGTTATTGAAATGGCAACAGGGAAACCTCCATGGAGCCAACAGTATCAAGAGGTCGCTGCTCTTTTCCATATAGGAAATACTAAGTCCCATCCGCCCATTCCTGAGAATCTATCTGCTGAGGCTAAAGATTTTCTGTTAAAATGTCTACAAGAGGAACCAAACTCAAGGCCTACTGCATCAGATTTGCTGCAGCATCCATTTGTCTCATGTGAGTATCAAGAACCTGTTGCAGTAGTCCTTGCCTCTTCTGTGGAATCTGGGAAACAGATGGCTGATTCTAGGCTGAACTCCAATGATCTTAAAAAGTCTACAATCCAACGTTCAACCTGTGAGGGCTTGAAAGATATTTGTGAAATGGGTAGCTTGAGGTGCTCTTCTGTATTTTCTGGGAACTATGGGTCACAGTCCAACTGGGGCTCGAGCAATTTTGAGGATGACATGTGCCAGATAGATGATAAAGATCTGTTTGTTAGTTCATCAATTAAGTACAAATCTATTTTATCATCAACTGATTTGAATAAGAGTTTCAATCCTATGTGTGAACCCACTGATGACTTGGATGAGAGCTCAGAGTTGGGAGGCAATTTAATGGAATTGTCTGGCGTTCAAACTGGCAAGGGGAGTGACTTCACTTTTCCTTGTGGTCAATCAGCAGCTGAGGATGATGAAGAGGTTACGGAATCAAAGATTAAAGCCTTCCTGGATGAGAAGGCTCTAGAACTAAAGAAGCTGCAAACACCTTTATACGAAGAGTTCCGTAGCACAGTTAATGCAGCTAATGCATTAGGAACAGTTGGAATTGAGAATATCAAGAGCGTGTCTAAGTTTTTGAAATTGCCTCCCAAATGTGGGTCACCAAGTAAGCTGCGTGGTAAAAGACTCTCATCAATTGATGCTGGTAACTGTTCCAGCCGTCAGAGCCGTATAAAACAAGCTGGCATGTTGCAAGATCGAGCTTTGCAGGAAATTCAGTCGCCACAACTTGGGGAATGGAACAACTTACTTCAAACCCAGCCAGACTCTTCTACACCAAGTTTCTCTGAAAGACAAAGGAAATGGAAAGAAGAGCTTGAGGAAGAACTTAAAAGGAAACGAGAAATGATGCGGAGAGGAATTGTAGGAGCAATTCACTAA 1911 43.59 MQDFFGSVRRSLVFLAPDGDDGGRFGGLVEKIGSSIRKSRNGLFSKQSLRALPPVAKEDAPPIWWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVSIAANSASREKAQAHIRELEEEVRLLKNLSHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGNTKSHPPIPENLSAEAKDFLLKCLQEEPNSRPTASDLLQHPFVSCEYQEPVAVVLASSVESGKQMADSRLNSNDLKKSTIQRSTCEGLKDICEMGSLRCSSVFSGNYGSQSNWGSSNFEDDMCQIDDKDLFVSSSIKYKSILSSTDLNKSFNPMCEPTDDLDESSELGGNLMELSGVQTGKGSDFTFPCGQSAAEDDEEVTESKIKAFLDEKALELKKLQTPLYEEFRSTVNAANALGTVGIENIKSVSKFLKLPPKCGSPSKLRGKRLSSIDAGNCSSRQSRIKQAGMLQDRALQEIQSPQLGEWNNLLQTQPDSSTPSFSERQRKWKEELEEELKRKREMMRRGIVGAIH 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8128047 8132752 + CaPI482276_06g005990.1 Cam06g0599 128899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0599 636 ProSiteProfiles Protein kinase domain profile. 65 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0599 636 Gene3D Transferase(Phosphotransferase) domain 1 65 368 - -
Cam06g0599 636 FunFam Serine/threonine-protein kinase STE11 62 155 - -
Cam06g0599 636 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524(InterPro)
Cam06g0599 636 CDD STKc_MAPKKK 65 327 - -
Cam06g0599 636 SMART serkin_6 65 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0599 636 MobiDBLite consensus disorder prediction 593 612 - -
Cam06g0599 636 Pfam Protein kinase domain 66 327 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0599 636 Coils Coil 606 629 - -
Cam06g0599 636 SUPERFAMILY Protein kinase-like (PK-like) 65 328 IPR011009 -
Cam06g0599 636 Coils Coil 98 125 - -
Cam06g0599 636 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 53 328 IPR050538 -
Cam06g0599 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g0599 636 FunFam Mitogen-activated protein kinase kinase kinase 2 64 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1708 Cam-Chr1:30668315 Cam06g0599 Cam-Chr6:8128047 2.10E-63 dispersed
Cam06g0599 Cam-Chr6:8128047 Cam08g2031 Cam-Chr8:25951119 2.30E-59 dispersed
Cam02g1641 Cam-Chr2:29418507 Cam06g0599 Cam-Chr6:8128047 2.70E-207 transposed
Cam04g0638 Cam-Chr4:20381620 Cam06g0599 Cam-Chr6:8128047 4.00E-06 transposed
Cam06g0250 Cam-Chr6:4316205 Cam06g0599 Cam-Chr6:8128047 1.60E-06 transposed
Cam10g1489 Cam-Chr10:28603421 Cam06g0599 Cam-Chr6:8128047 2.70E-63 transposed
Cam02g1691 Cam-Chr2:29917626 Cam06g0599 Cam-Chr6:8128047 8.00E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85249 PF00069 Pkinase 3.30E-73 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0599 K20606 - csv:101217427 1201.42