Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0667 ATGGCTCGGGACGGGCATGTAGTGCCAGTGGATCCACAGACGGTGCTGACTGTGAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTGGATTGTACGGGCCAAGGGACCGTCCTCGATGTCGACAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACGATTTTAGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTGCAGAGGCGACTGCCTCCTTCTAATGCCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGGGCCAACATGATGGTGAAGCTGAAGAAGATGACTCGCCATTTGAATTTCGTGCCCTTGAAGTTGCTTTGGAAGCCATATGTAGTTTTCTTGCTGCACGGACAACTGAACTGGAGACTGCTGCTTATCCTGCCCTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCGAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTGGACGATGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGTTCATCCTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACAATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTGTTGCAACTGTACGAGGGGATGAGGATGATATTGAGGAGCTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGAACATTGAACAAATTAACCACACTGCGAGAATATATTGATGACACAGAAGATTATATTAATATCCAGCTTGACAATCACCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTCGGCATGAACATTCCATACACTTGGAATGACGATCACGGATACATGTTTAAATGGGTTGTCATTGTTTCTGGAGTAGCTTGTGCGGTGTTGTTTGTCACAATTATTTACTATGCTCGCTACAAAGAACCAAAAGATGAATATGGTTTTCTTATTTTAATTGGAACTGAAGAGAGATTTTACAACATAAAGGATAACCAACTTAAACAGAAAACAACAAAAGGTTTAACTGATCTGTTCTCCAATGCTTTTGTGACCATGGCGTCAATTAATTCTTCGACAATGGTCAGGCCGAGGAGATCATGGGTCAGCCCATTCGGGACCTTGGATGGAACCACTCCAATATCTATCTCCACCAAGATCTTCTGGGGTGGTCCTGGTCCGAATGATAAGGGGCTTTCCAGAAAGCACGTCGTTCAAGTCACCGACGCTTCACTGAAGCGATTGGATTTGGAAGATTATGTTGATGTTATAAAATAA 1515 43.43 MARDGHVVPVDPQTVLTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNAFQFQVQGDGKEYQGQHDGEAEEDDSPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIVSGVACAVLFVTIIYYARYKEPKDEYGFLILIGTEERFYNIKDNQLKQKTTKGLTDLFSNAFVTMASINSSTMVRPRRSWVSPFGTLDGTTPISISTKIFWGGPGPNDKGLSRKHVVQVTDASLKRLDLEDYVDVIK 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8992920 8998715 + CaPI482276_06g006670.1 Cam06g0667 128967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0667 504 Pfam Magnesium transporter MRS2-like 40 234 - -
Cam06g0667 504 Pfam Magnesium transporter MRS2-like 272 319 - -
Cam06g0667 504 SUPERFAMILY NAD(P)-linked oxidoreductase 460 502 IPR036812 -
Cam06g0667 504 Gene3D Magnesium transport protein CorA, transmembrane region 105 322 - -
Cam06g0667 504 Coils Coil 193 220 - -
Cam06g0667 504 Gene3D - 14 99 - -
Cam06g0667 504 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 328 380 IPR045863 -
Cam06g0667 504 CDD Mrs2_Mfm1p-like 28 387 IPR039204 -
Cam06g0667 504 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 387 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cam06g0667 504 FunFam Magnesium transporter MRS2-1 16 99 - -
Cam06g0667 504 Gene3D - 457 503 IPR036812 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1114 Cam-Chr5:10262101 Cam06g0667 Cam-Chr6:8992920 5.40E-87 dispersed
Cam06g0667 Cam-Chr6:8992920 Cam10g1389 Cam-Chr10:27538192 3.80E-89 dispersed
Cam06g0667 Cam-Chr6:8992920 Cam07g0060 Cam-Chr7:1741241 6.40E-145 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0667 K16075 - csv:101203841 694.501