Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam06g0667 | ATGGCTCGGGACGGGCATGTAGTGCCAGTGGATCCACAGACGGTGCTGACTGTGAAGAAGAAGAAACAGTCTTCTCGGAATTGGATTCTACTGGATTGTACGGGCCAAGGGACCGTCCTCGATGTCGACAAGCATGCTATTATGCATCGAGTTCAAATTCATGCTCGAGACCTTCGGATTCTTGATCCTTTGCTTTCTTATCCCTCCACGATTTTAGGGCGTGAGAGGGCCATTGTTCTTAATCTCGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCGACAGATGAACATGTCATCCCTGTGGTTGAGGAGCTGCAGAGGCGACTGCCTCCTTCTAATGCCTTCCAGTTTCAAGTTCAAGGAGATGGTAAAGAGTATCAGGGCCAACATGATGGTGAAGCTGAAGAAGATGACTCGCCATTTGAATTTCGTGCCCTTGAAGTTGCTTTGGAAGCCATATGTAGTTTTCTTGCTGCACGGACAACTGAACTGGAGACTGCTGCTTATCCTGCCCTGGATGAGCTTACTGCCAAGATTAGTAGCCGCAACTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACCAGGTTGACTGCGAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTGGACGATGATGATGATATGGCAGACCTTTACTTGTCAAGAAAGATGAGTTCATCCTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCCTCTCCTACAATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTGTTGCAACTGTACGAGGGGATGAGGATGATATTGAGGAGCTTGAAATGTTACTGGAGGCTTACTTTATGCAGATTGATGGAACATTGAACAAATTAACCACACTGCGAGAATATATTGATGACACAGAAGATTATATTAATATCCAGCTTGACAATCACCGAAATCAACTCATTCAGTTGGAGCTCTTTTTAAGTTCTGGAACTGTTTGTTTGTCTATCTATTCTTTGGTGAGTGCAATATTCGGCATGAACATTCCATACACTTGGAATGACGATCACGGATACATGTTTAAATGGGTTGTCATTGTTTCTGGAGTAGCTTGTGCGGTGTTGTTTGTCACAATTATTTACTATGCTCGCTACAAAGAACCAAAAGATGAATATGGTTTTCTTATTTTAATTGGAACTGAAGAGAGATTTTACAACATAAAGGATAACCAACTTAAACAGAAAACAACAAAAGGTTTAACTGATCTGTTCTCCAATGCTTTTGTGACCATGGCGTCAATTAATTCTTCGACAATGGTCAGGCCGAGGAGATCATGGGTCAGCCCATTCGGGACCTTGGATGGAACCACTCCAATATCTATCTCCACCAAGATCTTCTGGGGTGGTCCTGGTCCGAATGATAAGGGGCTTTCCAGAAAGCACGTCGTTCAAGTCACCGACGCTTCACTGAAGCGATTGGATTTGGAAGATTATGTTGATGTTATAAAATAA | 1515 | 43.43 | MARDGHVVPVDPQTVLTVKKKKQSSRNWILLDCTGQGTVLDVDKHAIMHRVQIHARDLRILDPLLSYPSTILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNAFQFQVQGDGKEYQGQHDGEAEEDDSPFEFRALEVALEAICSFLAARTTELETAAYPALDELTAKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKMSSSSPVSGSGPANWFPASPTIGSKISRASRASVATVRGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIVSGVACAVLFVTIIYYARYKEPKDEYGFLILIGTEERFYNIKDNQLKQKTTKGLTDLFSNAFVTMASINSSTMVRPRRSWVSPFGTLDGTTPISISTKIFWGGPGPNDKGLSRKHVVQVTDASLKRLDLEDYVDVIK | 504 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 8992920 | 8998715 | + | CaPI482276_06g006670.1 | Cam06g0667 | 128967 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam06g0667 | 504 | Pfam | Magnesium transporter MRS2-like | 40 | 234 | - | - | |
Cam06g0667 | 504 | Pfam | Magnesium transporter MRS2-like | 272 | 319 | - | - | |
Cam06g0667 | 504 | SUPERFAMILY | NAD(P)-linked oxidoreductase | 460 | 502 | IPR036812 | - | |
Cam06g0667 | 504 | Gene3D | Magnesium transport protein CorA, transmembrane region | 105 | 322 | - | - | |
Cam06g0667 | 504 | Coils | Coil | 193 | 220 | - | - | |
Cam06g0667 | 504 | Gene3D | - | 14 | 99 | - | - | |
Cam06g0667 | 504 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 328 | 380 | IPR045863 | - | |
Cam06g0667 | 504 | CDD | Mrs2_Mfm1p-like | 28 | 387 | IPR039204 | - | |
Cam06g0667 | 504 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 13 | 387 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
Cam06g0667 | 504 | FunFam | Magnesium transporter MRS2-1 | 16 | 99 | - | - | |
Cam06g0667 | 504 | Gene3D | - | 457 | 503 | IPR036812 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam05g1114 | Cam-Chr5:10262101 | Cam06g0667 | Cam-Chr6:8992920 | 5.40E-87 | dispersed | |
Cam06g0667 | Cam-Chr6:8992920 | Cam10g1389 | Cam-Chr10:27538192 | 3.80E-89 | dispersed | |
Cam06g0667 | Cam-Chr6:8992920 | Cam07g0060 | Cam-Chr7:1741241 | 6.40E-145 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam06g0667 | K16075 | - | csv:101203841 | 694.501 |