Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0711 ATGAGCCAACAAGTGGGAGTGCTAAATGCACTCGACATTGCAAAAACCCAATGGTACCATTTCACTGCAATCATCATCGCCGGAATGGGTTTCTTCACCGACGCCTACGATCTCTTCTGCATCTCCATCGTCACTAAACTCCTCGGCCGTATCTATTACCATATTCCAAATTCCCCCAGACCCGGCTCCCTCCCCCCCAACATCGCCGCCGCCGTCAACGGCGTCGCCTTCTGCGGCACCCTCAGCGGCCAACTCTTCTTCGGCTGGCTCGGCGACAAGCTCGGCCGCAAGAAAGTCTACGGCATTACCCTCATTCTCATGGTCGTCTGTTCCATCGCCTCCGGCCTCTCCTTCGGCAACTCCCCAAAAGCCGTCATCGCCACCCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACCATCATGTCCGAATACGCCAACAAAAAAACCCGCGGCGCCTTCATCGCCGCGGTCTTTGCAATGCAAGGCTTCGGAATTTTAGGGGGAGGAATCGTCGCTTTAATCGTCTCTTCCGCTTTCAACAACCGCTTCCCAGCACCACCGTACATGGACAATCCCAACCGCCCCACAATACCGGAGGCCGATTACGTGTGGCGAATCGTCTTAATGTTCGGCGCAATTCCAGCCGCGTTAACTTATTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCCTTAGTAGCCCAAAATGCAAAACAAGCCGCCGCCGACATGTCGAAAGTGCTGCAAGTGCAACTCGAATTAGCCGAACATGAAAAAACCATGATCGAACCAAATGAAAATCAAAACCGTTTCGGTTTATTCTCTCGCGAATTTGCGAAACGTCATGGGCTCCACTTAATTGGAACCACCACCACGTGGTTTCTGTTAGACATAGCGTTTTACAGCCAAAATCTCTTCCAGAAAGACATTTTCACCGCCATTGAATGGCTTCCATCGGCGGCGACGATGAGCGAATTAGAAGAATGCTTCAAAATCGCACGTGCTCAGACACTAATTGCCCTTTGCGGGACAGTTCCAGGTTACTGGTTCACGGTGGCGCTCATCGATTACTTGGGGAGATTTTTTATTCAATTGATGGGATTCATAATGATGACGATCTTCATGTTTGCTCTGGCGTTTCCTTACAATCATTGGAAGGAGAAGCCTCACAGAATCGGGTTTGTGGTGATGTATTCGTTGACGTTTTTCTTTGCGAATTTCGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACATGTCATGGGATATCGGCGGCGGCGGGAAAAGCAGGGGCAATAGTGGGAGCGTTTGGGTTTTTGTATGCAGCGCAGAGTAAGGATCCGAAACTGACGGATCCGGGCTACCCGACGGGGATCGGAGTGAAGAATGCTTTGATTGTGTTAGGATGTGTAAATTTCTTGGGGGCATTGTTTACTCTGTTAGTGCCGGAATCGAAAGGGAAGTCATTGGAGGAGCTGACAGGGGAGAATGACGGGAAGGACAGGAATGGGAATACCATTGCAAATATACCTACCGATGTAAATGTCTAA 1614 51.12 MSQQVGVLNALDIAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIPNSPRPGSLPPNIAAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGITLILMVVCSIASGLSFGNSPKAVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALIVSSAFNNRFPAPPYMDNPNRPTIPEADYVWRIVLMFGAIPAALTYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVQLELAEHEKTMIEPNENQNRFGLFSREFAKRHGLHLIGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPSAATMSELEECFKIARAQTLIALCGTVPGYWFTVALIDYLGRFFIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPKLTDPGYPTGIGVKNALIVLGCVNFLGALFTLLVPESKGKSLEELTGENDGKDRNGNTIANIPTDVNV 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9628168 9629781 + CaPI482276_06g007110.1 Cam06g0711 129011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0711 537 FunFam Inorganic phosphate transporter 1-6 19 529 - -
Cam06g0711 537 MobiDBLite consensus disorder prediction 513 537 - -
Cam06g0711 537 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cam06g0711 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 513 - -
Cam06g0711 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857(InterPro)
Cam06g0711 537 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Cam06g0711 537 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
Cam06g0711 537 Gene3D MFS general substrate transporter like domains 273 531 IPR036259 -
Cam06g0711 537 NCBIfam phosphate:H+ symporter 10 517 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cam06g0711 537 CDD MFS_PhT 24 507 - -
Cam06g0711 537 MobiDBLite consensus disorder prediction 521 537 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0490 Cam-Chr5:4323056 Cam06g0711 Cam-Chr6:9628168 1.40E-254 dispersed
Cam06g0711 Cam-Chr6:9628168 Cam07g0118 Cam-Chr7:2381909 1.20E-237 dispersed
Cam05g1034 Cam-Chr5:9330340 Cam06g0711 Cam-Chr6:9628168 3.60E-183 wgd
Cam05g0488 Cam-Chr5:4307355 Cam06g0711 Cam-Chr6:9628168 1.20E-231 wgd
Cam06g0711 Cam-Chr6:9628168 Cam07g0099 Cam-Chr7:2148986 2.90E-236 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0711 K08176 - csv:101212412 984.556