Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0720 ATGAAGACAGAGTGTTCCTCTTCTTCACTGCTGCTTCTTCTTCACCCGAAATCGCGGGCCGTACATTTCCTTACTCTCTTCTCTAGGGTTTCGCTTCGCTTCGCTCCGCTTCTCATTGCTTTCCTGCTGTTTTTTCTCGGACAAGTTGTACGAAAATCACATTATCTAACCTACTGGAGACGTACTGCTCAGTATATGTATATTTGCTGTACCACAACGTACTGGGTGAACTATGTCATGTGTTGGTTTAATAAGTTTAGATCCAAAGACAAGCCAAAGCCCTCAACAAATAAGGAGAGTACAGGCAATGCAAGAGATGCATCAAGAGCACCAACCAGTGAAGATGTACCCTCAAATGTGACCAAGCAGAAGGTTGCAGCTGCCAAGCAGTACATAGAAAACCATTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTGGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAGGAAGAGCAAAGCAACCTGCTCAAGCATCTAGAGAAGAAGGAAACAGAGTATATGCGTCTTCAAAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAACACGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTTAAGCTGTACTGCTCTTTCCAAGATGAAGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGAGATATGATGACTTTGCTGATGAGGAAAGATACTCTAACCGAAGACGAGGCTCGGTTTTATGTTGGTGAAACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATTCATAGAGATATCAAGCCGGATAACTTACTTCTTGACAAGGACGGCCATATGAAATTATCAGATTTCGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAACCTCAGTGGTGCTCTTCAAAGTGATGGGCGTCCTGTGGCATCAAAACGCACACAACAGGAACAACTGCAGCATTGGCAAAGGAATAGGCGGATGCTTGCTTATTCAACAGTTGGAACTCCTGATTATATTGCCCCGGAAGTTTTGTTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCCATCATGTACGAAATGCTTGTGGGATTCCCACCGTTTTACTCAGATGAGCCAATGTCAACTTGCAGGAAGATAGTTAATTGGAGAACTCATTTGAAATTTCCAGAAGAAGCAAAGCTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGAAGAAATAAAGGCACACCCGTGGTTCAAGGGCATTGAGTGGGATAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAACTTTGAGAAGTTTGAAGAGACTGAAAACGCAATTCAAACTTCATCAAAATCAGGTCCATGGAGAAAGATGTTGTCATCGAAGGATATCAATTTTGTTGGTTATACGTACAAAAACTTTGAAATCATTGATGATAATCAATTGCCTGGAATCGCTGAACTGAAGAAGAAGACCGCAAAATCTAAAAGACCTTCCATCAAATCACTTTTTGATAACGAATCTGCAATGGCTAATCAACCTGTTCAAGGAAGCTTTCTGAAACTCTTGCCTCCCCAACTAGAAGTCCCTGAGAAACCGATGAGCGCCAATGAGAAGCATTCATAA 1881 41.63 MKTECSSSSLLLLLHPKSRAVHFLTLFSRVSLRFAPLLIAFLLFFLGQVVRKSHYLTYWRRTAQYMYICCTTTYWVNYVMCWFNKFRSKDKPKPSTNKESTGNARDASRAPTSEDVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQSDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAEEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENAIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKTAKSKRPSIKSLFDNESAMANQPVQGSFLKLLPPQLEVPEKPMSANEKHS 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9751194 9758696 + CaPI482276_06g007200.1 Cam06g0720 129020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0720 626 Pfam Protein kinase domain 196 345 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0720 626 Pfam Protein kinase domain 390 493 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0720 626 SMART pkinase_C_6 494 558 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0720 626 MobiDBLite consensus disorder prediction 90 121 - -
Cam06g0720 626 Pfam Protein kinase C terminal domain 512 556 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0720 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g0720 626 FunFam Non-specific serine/threonine protein kinase 392 511 - -
Cam06g0720 626 PANTHER SERINE/THREONINE-PROTEIN KINASE 101 560 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cam06g0720 626 SMART serkin_6 194 493 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0720 626 Gene3D Phosphorylase Kinase; domain 1 184 279 - -
Cam06g0720 626 ProSiteProfiles AGC-kinase C-terminal domain profile. 494 566 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0720 626 FunFam Non-specific serine/threonine protein kinase 278 345 - -
Cam06g0720 626 CDD STKc_NDR_like 192 557 - -
Cam06g0720 626 ProSiteProfiles Protein kinase domain profile. 194 493 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g0720 626 ProSitePatterns Protein kinases ATP-binding region signature. 200 223 IPR017441 GO:0005524(InterPro)
Cam06g0720 626 Coils Coil 143 177 - -
Cam06g0720 626 MobiDBLite consensus disorder prediction 97 121 - -
Cam06g0720 626 SUPERFAMILY Protein kinase-like (PK-like) 169 546 IPR011009 -
Cam06g0720 626 CDD MobB_NDR_LATS-like 128 189 - -
Cam06g0720 626 FunFam Non-specific serine/threonine protein kinase 165 277 - -
Cam06g0720 626 Gene3D Transferase(Phosphotransferase) domain 1 280 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2600 Cam-Chr1:37526205 Cam06g0720 Cam-Chr6:9751194 5.40E-222 dispersed
Cam04g1319 Cam-Chr4:27013369 Cam06g0720 Cam-Chr6:9751194 6.30E-44 dispersed
Cam04g1320 Cam-Chr4:27041277 Cam06g0720 Cam-Chr6:9751194 9.20E-21 dispersed
Cam05g1974 Cam-Chr5:28605096 Cam06g0720 Cam-Chr6:9751194 2.10E-183 dispersed
Cam06g0720 Cam-Chr6:9751194 Cam09g0779 Cam-Chr9:7915457 4.40E-244 dispersed
Cam06g0720 Cam-Chr6:9751194 Cam03g1554 Cam-Chr3:30477118 2.30E-184 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85253 PF00069 Pkinase 8.00E-66 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0720 K08790 - csv:101205120 1093.18