Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0773 ATGGCGGCTACAGATTGCTCCCTGACTCTAGCTCAGCTCCTCGGCCCCAATGTCACCAACTCCGGCGCCGCCGCCTCCTTCATTTGCGACCAATTCTCCACCTCCACCAACAACTTTTCCGACACCAAATTCGCCGTCGACACCGTTTACCTCCTCTTCTCCGCCTACCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGTGCCGGCTCCGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTCGACGCTGCTGCCGGCGGCCTTTTCTACTACCTCTTCGGCTTCGCCTTCGCCTTCGGCACCCCTTCCAACCCCTTCATCGGCCGCCATTTCTTTGGCCTCAAGTCAATCCCTTCCACCGCCGCCGATTACAGCTTCTTTCTCTATCAATGGGCTTTCGCCATCGCTGCCGCCGGTATCACCAGCGGCTCAATTGCCGAGCGAACCCAATTTGTTGCCTATTTGATCTACTCCTCCGTTTTGACCGGTTTCGTTTACCCGGTCGTGTCCCATTGGTTCTGGTCTCCAGACGGTTGGGCCAGCCCGTCACGGTCCAACGGTGACCTCTTGTTTGGAACTGGAGTCATAGATTTCGCCGGTTCCGGCGTGGTTCACATGGTCGGTGGAATCGCTGGACTTTGGGGAGCTTTAATAGAAGGACCACGAATCGGCCGGTTCGACAGAAGCGGCAGATCCGTTGCTCTACGAGGCCATAGCGCTACGTTAGTTGTTCTCGGTACCTTCATGCTTTGGTTCGGTTGGTACGGGTTCAACCCCGGTTCCTTCACTAAAATCTTAGTTCCGTATGGTTCGAATAATTACTACGGACAGTGGAGTGCCGTCGGTCGAACCGCCGTGACGACGACACTTGCCGGTTGCACGGCTGCGCTAACAACGCTTTTCGGAAAACGAATTCTATCCGGCCATTGGAACGTTACCGACGTCTGCAATGGCTTACTTGGCGGCTTTGCCGCCATAACCTCTGGCTGCTCGGTGGTGGAGCCGTGGGCCGCTGTGATATGTGGGTTTGTGGCGGCGGTGGTTTTAATCAGCTGTAACAAACTGGCAGAGAAGGTGAAATTTGACGACCCATTGGAGGCGGCACAACTGCACGGCGGTTGCGGGGCGTGGGGGATAATTTTCACGGCGTTGTTCGCGACGAAGAAGTATGTGAACGAGGTGTACGGCGGAGATATGGAACGGCCACACGGGCTGTTTATGGGCGGCGGAGGGAAGTTGTTGGGTGCGCATTTGATACAAATTTTGGTGATTGTTGGGTGGGTTAGCGTTACAATGGGGCCGTTGTTTTTTGGGCTACATAAGCTGAAGCTATTAAGAATCTCGCCGGAGGATGAGATGGCCGGAATGGACATGACCAGACACGGTGGATTTGCTTACGTCTACCATGATGAAGATGAATCTCCGACCAATGGAGTTCAAATGAGTAAGATTAAGCCAAGAGAAACAAGTCCAATTGGAAATTAA 1503 54.22 MAATDCSLTLAQLLGPNVTNSGAAASFICDQFSTSTNNFSDTKFAVDTVYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNPFIGRHFFGLKSIPSTAADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWASPSRSNGDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSATLVVLGTFMLWFGWYGFNPGSFTKILVPYGSNNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAVICGFVAAVVLISCNKLAEKVKFDDPLEAAQLHGGCGAWGIIFTALFATKKYVNEVYGGDMERPHGLFMGGGGKLLGAHLIQILVIVGWVSVTMGPLFFGLHKLKLLRISPEDEMAGMDMTRHGGFAYVYHDEDESPTNGVQMSKIKPRETSPIGN 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 10410022 10411524 - CaPI482276_06g007730.1 Cam06g0773 129073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0773 500 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam06g0773 500 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam06g0773 500 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam06g0773 500 PANTHER AMMONIUM TRANSPORTER 23 480 - GO:0005887(PANTHER)|GO:0008519(PANTHER)|GO:0072488(PANTHER)|GO:0097272(PANTHER)
Cam06g0773 500 MobiDBLite consensus disorder prediction 478 500 - -
Cam06g0773 500 SUPERFAMILY Ammonium transporter 46 453 - -
Cam06g0773 500 Gene3D Ammonium transporter AmtB like domains 26 491 IPR029020 -
Cam06g0773 500 FunFam Ammonium transporter 28 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0432 Cam-Chr5:3919826 Cam06g0773 Cam-Chr6:10410022 3.40E-237 dispersed
Cam06g0773 Cam-Chr6:10410022 Cam11g1038 Cam-Chr11:19764934 3.40E-207 dispersed
Cam06g0773 Cam-Chr6:10410022 Cam07g0144 Cam-Chr7:2589311 3.60E-204 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0773 K03320 - csv:101212168 947.192