Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g0803 ATGTGGATTGTTCGTGGGATTTTTGTGGGATTGATTTTGATGATGATAATATTTGTAAGAGGAAATGAAGGTCAATCTTATAAAAGAGTAGGAGTGAAGAAATTGGCATGGAAGACTGTGGTTGTTGACCAGAATGGCCATGGAAATTTCTCTACCATTCAAGCTGCCATTGATTCTGTTCCTTCTAATAATAGGTTTTGGATCTCCATTCATGTTAACCCTGGTGTTTATAGAGAGAAGGTGAAAATCCCATATGATAAACCATATATCATTTTGAAAGGACAAAGAAAAAGAACAACAAAGGTTGTTTGGGACGACCATCTCACTGTTGCTCAGAGCCCTACTTTCACTTCTTCAGCTGATAATATTGTCGTCAAATCCATCACTTTTGTGAATTCTTACAACTATCCATGGAAGAATGGAAATCCAAGAGTTCCAGCAGTAGCAGCAATGATTACAGGCGACAAGTCGTCTTTCTATAGATGTGGTTTCTATGGAGTTCAGGACACATTATGGGATGATCAAGGACGACATTACTATCATCGTTGCACCATTCAAGGAGCTGTCGACTTTATTTTTGGAGCTGCCCAATCCATTTTTCAGGGGTGTTCAATATCAGTGGTTGGAGAAGCACTTCTTCCATTAGGGTCCACAAGCTTCATAACAGCACAAGGAAGAACCAACCCAAATGATGCAAATGGTTTTGTTTTCAAAGAATGCAAGGTGTTTGGGAGTGGCTCAGCCTTCTTAGGAAGGCCATGGAGAGGCTACTCAAGAGTTATCTTTTACAACTCCAACTTCTCCAACATTATAAACCCTTATGGTTGGGATCCTTGGCATTTTGTTGGTCAAGAGAACCAACTTACCTATGCAGAAAATGGGTGTTACGGACCAGGTGCTGACATGTCGCATCGAGTAAAATGGGAAAAGAAGCTCAATTTGAATGAAATACGACGACTCACTAGCATGAGTTTTATCGACACTGAAGGTTGGATCCAAAACCAACCTTGCCGTCAATCGCTGTTGAAGATCCATTGGACGGTTCTGAAAGTTAAACGAGAAAATCGGATTTGA 1074 40.5 MWIVRGIFVGLILMMIIFVRGNEGQSYKRVGVKKLAWKTVVVDQNGHGNFSTIQAAIDSVPSNNRFWISIHVNPGVYREKVKIPYDKPYIILKGQRKRTTKVVWDDHLTVAQSPTFTSSADNIVVKSITFVNSYNYPWKNGNPRVPAVAAMITGDKSSFYRCGFYGVQDTLWDDQGRHYYHRCTIQGAVDFIFGAAQSIFQGCSISVVGEALLPLGSTSFITAQGRTNPNDANGFVFKECKVFGSGSAFLGRPWRGYSRVIFYNSNFSNIINPYGWDPWHFVGQENQLTYAENGCYGPGADMSHRVKWEKKLNLNEIRRLTSMSFIDTEGWIQNQPCRQSLLKIHWTVLKVKRENRI 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11062833 11069795 + CaPI482276_06g008030.1 Cam06g0803 129103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g0803 357 FunFam Pectinesterase 34 336 - -
Cam06g0803 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 334 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cam06g0803 357 Pfam Pectinesterase 40 328 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cam06g0803 357 SUPERFAMILY Pectin lyase-like 38 334 IPR011050 -
Cam06g0803 357 ProSitePatterns Pectinesterase signature 2. 185 194 IPR033131 -
Cam06g0803 357 Gene3D - 35 341 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0776 Cam-Chr5:6757638 Cam06g0803 Cam-Chr6:11062833 4.30E-63 dispersed
Cam06g0803 Cam-Chr6:11062833 Cam10g1130 Cam-Chr10:24405014 1.50E-84 dispersed
Cam06g0803 Cam-Chr6:11062833 Cam08g1965 Cam-Chr8:25531456 4.10E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g0803 - - - 0.0