Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam06g1010 | ATGGAAGATTCCTCCAAATCAGCCGATGATCGGAAGACCCGTTTCTATCACCCCTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAACTCCCCACCTCTCCCGAGCATCTCTTCTTCGAAGAAGCCGCCAGGCCCCACCGTTCTTGGGGCGAAAACCTCCAGTACTACACCGGAATTGGCTACCTCTCCGGCGCCATTCTCGGCGGCGCCAGGGGCTCTGTCCAGGGCCTCAGGGCGGCCGAGCCCGGCGACTCTGTCAAACTCCGTGTCAATCGAGTTCTCAACGCTGGGGGCCAGCTTGGCCGGAGGGCTGGGAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCAATTGAGAGGTACTGATGATGTCTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCGCTTTATAAAGCGGCTTCCGGGCCAAGATCTGCCGCCATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGCGGGAAAGCAGGCAGTTAAGAGATATGTGCCAATATAG | 552 | 56.7 | MEDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGIGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 15965823 | 15966374 | + | CaPI482276_06g010100.1 | Cam06g1010 | 129310 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam06g1010 | 183 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 57 | 166 | - | - | |
| Cam06g1010 | 183 | PANTHER | TIM23 | 32 | 170 | IPR045238 | GO:0005744(PANTHER)|GO:0008320(PANTHER)|GO:0022857(InterPro)|GO:0030150(PANTHER)|GO:0031305(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam06g1010 | Cam-Chr6:15965823 | Cam09g0076 | Cam-Chr9:1594543 | 6.30E-50 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam06g1010 | K17794 | - | csv:116401801 | 317.005 |