Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1137 ATGGGTTCACCAAAAACTGGACAACATGTGAGCTTTAATGCTCCAAGGCCATTTGGGCACAGGCTGAAATCGGATATGAAAGAGACGTTTTTCCCTGATGATCCGTTCAGACAGTTTCGAAATGAAAGAGACGCACTACAAAGAGTGAAAAAGGGGTTCCAATATTTCATACCCATATTGGAATGGTTTCCCAAATACAATTTGAATATGTTTAAGTATGATTTGCTTGCTGGTATTACCATTACCAGCCTTGCTATTCCTCAAGGCATTAGTTATGCCAAACTCGCCGTCCTCCCTCCCATTATCGGCCTCTATTCGAGCTTCGTTCCGCCGCTCGTGTATGCAGTGTTTGGAAGCTCAAAGCATCTGGCGGTGGGAACGGTGGCTGCATGTTCGTTGCTGATATCAGAAATTATTGGAGAAGTGGCTTCACCGGAAGAAGAACCCACATTGTATCTCCACTTGGTTTTCACCGCCACTTTTATCACCGGTATCATGCAGGCCGCATTAGGCTTTCTAAGATTGGGAATTTTGGTGGATTTCTTATCGCACTCAACAATCCTTGGGTTTATGGGAGGAACGGCTGTGATCATTTCCCTTCAACAACTAAAAGGCATATTTGGACTGACTCATTTCACCTCTAAAACTGACGTTTATTCCGTACTTCATGCCGTTTTCTCCCTTAGAAAAGAGTGGAAATGGCAAAGTGCTGTGGTGGGCATCGTTTTCCTTGTATTCCTCCAGTTTACTCGCTACTTAAGAAACAGAAACCCGAAGCTATTTTGGGTGTCAGCGATGGCTCCCATGGTGACTGTAATAATAGGGTGTTTGTTTGCATATTTCATCAATGGAACTCAGCATGGAATCTTAACTGTGGGTCATTTGAGCAAAGGAATAAACCCTCTTTCTATTCACTTCTTGAACTTTGACTCTAAATATTTATCAGCTGTGGTACAAGCTGGGTTGATCACTGGCCTTGTCGCTTTGGCGGAAGGAATAGCAATTGGTCGAAGCTTTGCAATTATGAAAAATGAACAAATCGATGGGAATAAGGAGATGATAGCTTTTGGTTTGATGAACATAGTGGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAGACCGCAGTGAACTTCAATGCCGGGTGTAGGACAGCAATGTCAAACATAGTTATGGCAATCTTCATGGCGCTCACCCTCCTCTTTCTAGCTCCTCTCTTCAGCTACACACCTCTTGTAGCCCTTTCCGCCATTATCATGTCTGCCATGCTTGGTCTCATCAAATATGAAGAAATGTATCATCTTCTCAAAGTTGACAAATTCGATTTTTGCATTTGTATGGCGGCTTTCTTGGGTGTTGCCTTCTTAAGCATGGATGTTGGCATCATGCTTTCGGTGGGACTTGCTTTACTGAGAGCTCTTCTGTACATGGCTAGACCAGCTACTTGCAAGCTCGGGAAAATACCAAACTCCAGTTTGTACAGAGATGTGGAGCAGTATCCTAATGCAACCAGAGCCCATGAAATTATGGTTCTTCAACTTGGTTCCCCTGTTTATTATGCCAACTCCAACTACATCAGAGAAAGGATTTTCAGATGGGTTCGTGATGAGCAAGCCGATCCCAACTATGGATCCGTCGAACATGTACTCCTGGAGTTGAGCGGAGTTACCTCAATCGACATGACAGGGATTGAAACTCTAGTTGAAATCCGCAAATCATTACAAGCAAATGGAATCCAGATGGGAATTGTAAACCCAAGAATTGTAGTGATGGAGAAGATGATAGCTTCGGATTTCACAAACACAATCGGAAAAGAGAACATTTATTTATCGGTGGATGAGGGAGTGGAAAGGTGCAGAGATTTGGTACCGAAATTAAAGCAAAGAGAAACAAGTCCTCGAAGTTCGAACATGACGACAATGGAGCAGCAAGTATAA 1947 43.3 MGSPKTGQHVSFNAPRPFGHRLKSDMKETFFPDDPFRQFRNERDALQRVKKGFQYFIPILEWFPKYNLNMFKYDLLAGITITSLAIPQGISYAKLAVLPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLISEIIGEVASPEEEPTLYLHLVFTATFITGIMQAALGFLRLGILVDFLSHSTILGFMGGTAVIISLQQLKGIFGLTHFTSKTDVYSVLHAVFSLRKEWKWQSAVVGIVFLVFLQFTRYLRNRNPKLFWVSAMAPMVTVIIGCLFAYFINGTQHGILTVGHLSKGINPLSIHFLNFDSKYLSAVVQAGLITGLVALAEGIAIGRSFAIMKNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAIFMALTLLFLAPLFSYTPLVALSAIIMSAMLGLIKYEEMYHLLKVDKFDFCICMAAFLGVAFLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNSSLYRDVEQYPNATRAHEIMVLQLGSPVYYANSNYIRERIFRWVRDEQADPNYGSVEHVLLELSGVTSIDMTGIETLVEIRKSLQANGIQMGIVNPRIVVMEKMIASDFTNTIGKENIYLSVDEGVERCRDLVPKLKQRETSPRSSNMTTMEQQV 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 21672015 21675183 + CaPI482276_06g011370.1 Cam06g1137 129437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1137 648 CDD STAS_SulP_like_sulfate_transporter 503 615 - -
Cam06g1137 648 Pfam STAS domain 503 617 IPR002645 -
Cam06g1137 648 PANTHER SULFATE TRANSPORTER 44 623 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam06g1137 648 Pfam Sulfate permease family 71 452 IPR011547 GO:0016020(InterPro)
Cam06g1137 648 Gene3D STAS domain 482 625 IPR036513 -
Cam06g1137 648 NCBIfam sulfate permease 58 617 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam06g1137 648 FunFam Sulfate transporter 31 482 624 - -
Cam06g1137 648 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cam06g1137 648 ProSiteProfiles STAS domain profile. 502 622 IPR002645 -
Cam06g1137 648 SUPERFAMILY SpoIIaa-like 505 623 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1137 Cam-Chr6:21672015 Cam09g0713 Cam-Chr9:7098159 6.20E-201 dispersed
Cam06g1136 Cam-Chr6:21621796 Cam06g1137 Cam-Chr6:21672015 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1137 K17471 - csv:116402148 1157.51