Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1167 ATGGCTGCAGTTTTTTACTTTAACACCCGTCTCCAATTTTTCCTAATTTCATTTTCCCTGCTTCTTCTTCTTCTTCTTCTTCATCTTCATTCTGTGCAGTCTGAGCCCACCGCCGACAAGGCAGCTCTTCTCGATTTCTTGAACAAAACCCCTCATGAGAGTCGCCTTCAATGGAATGCTTCCGCCTCTGCCTGTACTTGGGTTGGAGTTGTCTGTGATGCGACTCAGTCGTTTGTTTTTGCTCTCCGGTTGCCTGGCGTGGGGCTTGTCGGTCCGATTCCGGTTAATACGCTAGGTCGGTTGAATCGGCTCCGAGTTCTCAGTCTCCGGTCGAATAGAATCTCTGGGGAGTTGCCGGCGGATTTTTCTAATTTGGGATTTCTTCGTAGTCTTTATCTTCAGGACAACGAGCTTTCCGGGGATTTTCCGGTGAGTGTGACTCAGTTGACTCGGTTGACTCGACTTGATCTCTCGTCCAACAATTTCTCTGGTTCGATTCCGTTTTCGGTGAATAATCTGACCCATTTGACTGGGCTTTTCTTGGAGAATAATGGGTTTTCGGGTTCTCTGCCGAGTATTCCTGCGGCTGCGACTAGTCTCACGGGATTCAATGTATCGAATAATAAGCTCAATGGATCCATTCCCGAAACCTTATCGAAATTCTCTGCTTCATCTTTCGCCGGAAATTTAGCGCTCTGCGGTGGTCCATTGCCGTCGTGCAACCCGTTTTTTCCCTCCCCTGCTCCATCGCCGACGTCAGCCGTGAAACCCCCACAAGTTCCCGTCGAGAAGAAGTCGAAAAAGCTCTCCATCGCTGCCATTGTCGGAATTGTCGTCGGCGCCGCTTTCTTTGCGTTTATATTGCTGTTTTTGCTCCTGTTTTGTCTCCGGAAGCGCGAGCGGGGGCAGCCGGCGAAGCCGCCGACTACGGTGGTTACTACTCGATCTGTTCCGGCGGAGGCAGGTACATCGTCTTCGAAAGACGACATCACCGGGGGATCAGTGGAGACAGAGAAAAACAGATTAGTGTTCTTCGAAGGTGGGGTTTACAGCTTCGATTTGGAGGACTTGTTGAGAGCTTCGGCGGAGGTTTTAGGAAAAGGAAGCGTCGGGACGTCGTACAAGGCGGTGCTGGAAGAAGGAACCACCGTGGTAGTGAAGAGATTGAAAGATGTGGTGATGACGAAGAAGGAATTCGAAACGCAAATGGAAGCTCTGGGAAATGTGAAACATGAAAATGTGGTTCCTCTCAGAGCTTTCTACTTTTCCAGAGATGAGAAATTGCTTGTTTCCGATTACATGGCCGCCGGCAGCCTTTCTTCTTCCCTTCACGGAAGCAGAGGATCCGGCCGTACGCCACTTGATTGGGACAACCGGATGAAAATCGCATTAAGCGCAGCAAGAGGATTGGCTCACCTCCACGTGTCGGGAAAGCTCGTCCACGGGAATATCAAATCGTCGAACATCCTCCTCCGCCCCAACCACGACGCCGCCGTCTCCGACTTCGGTTTGAACCCTCTCTTCGGCGCTTCGACGCCGCCCAACCGGATCGCCGGGTATCGCGCGCCGGAGGTTGTTGAAACCCGAAAGGTCACTTTCAAGTCCGACGTGTACAGTTTTGGCGTGTTGTTGTTGGAGCTTCTCACCGGGAAATCACCAAATCAAGCGTCGTTGGGTGAAGAAGGGATTGATCTTCCGCGGTGGGTCCAGTCGGTGGTCAGAGAGGAATGGACGGCGGAGGTTTTTGATGTGGAGTTAATGAGGTACCACAATATCGAAGAAGAGATGGTTCAGCTTTTACAAATTGCCATGGCCTGCGTTGCCACCGTGCCGGACCAGCGGCCGTCGATGCAGGAGGTGGTTCGTATGATTGAGGATTTGAACCGGGTGGAGACCGACGAGGGATTACGGCAGTCGTCCGATGACCCATCTAAAGGATCGGACGGCCAGACGCCGCCGCAAGAGTCCAGAACCACCCCACACGGAGCTGGCGGACCACCGTAG 2004 52.35 MAAVFYFNTRLQFFLISFSLLLLLLLLHLHSVQSEPTADKAALLDFLNKTPHESRLQWNASASACTWVGVVCDATQSFVFALRLPGVGLVGPIPVNTLGRLNRLRVLSLRSNRISGELPADFSNLGFLRSLYLQDNELSGDFPVSVTQLTRLTRLDLSSNNFSGSIPFSVNNLTHLTGLFLENNGFSGSLPSIPAAATSLTGFNVSNNKLNGSIPETLSKFSASSFAGNLALCGGPLPSCNPFFPSPAPSPTSAVKPPQVPVEKKSKKLSIAAIVGIVVGAAFFAFILLFLLLFCLRKRERGQPAKPPTTVVTTRSVPAEAGTSSSKDDITGGSVETEKNRLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVMTKKEFETQMEALGNVKHENVVPLRAFYFSRDEKLLVSDYMAAGSLSSSLHGSRGSGRTPLDWDNRMKIALSAARGLAHLHVSGKLVHGNIKSSNILLRPNHDAAVSDFGLNPLFGASTPPNRIAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVATVPDQRPSMQEVVRMIEDLNRVETDEGLRQSSDDPSKGSDGQTPPQESRTTPHGAGGPP 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 22363903 22366336 + CaPI482276_06g011670.1 Cam06g1167 129467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1167 667 ProSiteProfiles Protein kinase domain profile. 359 627 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1167 667 MobiDBLite consensus disorder prediction 628 667 - -
Cam06g1167 667 Gene3D Ribonuclease Inhibitor 37 193 IPR032675 -
Cam06g1167 667 FunFam Probable inactive receptor kinase RLK902 36 194 - -
Cam06g1167 667 Pfam Leucine Rich Repeat 199 220 IPR001611 GO:0005515(InterPro)
Cam06g1167 667 Pfam Leucine Rich Repeat 103 125 IPR001611 GO:0005515(InterPro)
Cam06g1167 667 Pfam Leucine Rich Repeat 151 173 IPR001611 GO:0005515(InterPro)
Cam06g1167 667 MobiDBLite consensus disorder prediction 302 333 - -
Cam06g1167 667 MobiDBLite consensus disorder prediction 642 658 - -
Cam06g1167 667 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 434 638 - -
Cam06g1167 667 FunFam pollen receptor-like kinase 1 329 433 - -
Cam06g1167 667 Pfam Leucine rich repeat N-terminal domain 38 73 IPR013210 -
Cam06g1167 667 Gene3D Ribonuclease Inhibitor 194 243 IPR032675 -
Cam06g1167 667 SUPERFAMILY Protein kinase-like (PK-like) 363 624 IPR011009 -
Cam06g1167 667 Gene3D Transferase(Phosphotransferase) domain 1 434 646 - -
Cam06g1167 667 Gene3D Phosphorylase Kinase; domain 1 327 433 - -
Cam06g1167 667 SUPERFAMILY L domain-like 49 221 - -
Cam06g1167 667 PANTHER OS05G0588300 PROTEIN 18 634 IPR050994 -
Cam06g1167 667 MobiDBLite consensus disorder prediction 307 331 - -
Cam06g1167 667 Pfam Protein tyrosine and serine/threonine kinase 363 623 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0632 Cam-Chr4:20340382 Cam06g1167 Cam-Chr6:22363903 2.10E-132 dispersed
Cam06g1167 Cam-Chr6:22363903 Cam10g1909 Cam-Chr10:33160136 3.20E-91 dispersed
Cam11g0283 Cam-Chr11:4305745 Cam06g1167 Cam-Chr6:22363903 2.20E-222 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85261 PF00069 Pkinase 5.90E-37 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1167 - - - 0.0