Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1302 ATGGGCGTCACCATTCTTCCAGATCTCGGGGCTCAGATTTTCATTCCCCTTTGTGCTCTAGTCGGTATCCTCTTCTCTTTGGTGCAGTGGTACTACGTTTCACAAGTTAAGCTCTCTTCTTCCCGAGATTCCTCTAATAACAACTCCGCCGCTGCTAAAAATGGCTACTCCGACTACCTTATTGAGGAGGAAGAAGGTGTCAACGACCATAACGTTGTTATTAAATGTGCCGAAATTCAGAACGCCATCTCTGAGGGGGCAACCTCCTTCCTTTTCACGGAGTACTACTATGTTGGCATATTTATGGTATTGTTTGCAGTCTTGATTTTTGTATTCCTTGGGTCAGTGGAGGGTTTTAGTACCAAGCCCCAAGCGTGCTCATATGACAAAACAAAGACTTGCAAGCCAGCTTTGGCGACGGCTATATTCAGCACTGTATCATTTATACTTGGTGCAGTTACTTCAGTGGTTTCTGGATTCCTTGGAATGAAAATTGCTACATATGCAAATGCCAGAACCACCTTGGAGGCAAGAAAAGGTGTTGGAAAGGCATTTATTACTGCTTTTAGGTCTGGTGCTGTCATGGGCTTCCTCCTAGCAGCCAATGGTCTCTTGGTTTTGTTTATTGCCATTAACCTCTTCAAATTGTACTATGGTGAAGATTGGGGTGGTCTTTTTGAGTCTATCACTGGGTATGGTCTTGGTGGATCTTCCATGGCTCTCTTTGGTAGAGTTGGTGGTGGTATCTACACTAAAGCTGCTGATGTTGGTGCTGACCTTGTGGGTAAGGTGGAAAGGAACATTCCTGAGGATGATCCAAGAAATCCAGCTGTGATTGCTGATAACGTCGGTGACAATGTTGGGGATATTGCCGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAATCATCCTGTGCTGCTCTTGTTGTTGCTTCTATCTCCTCTTTCGGCAACAACCATGAGTTCACACCAATGCTCTATCCTCTCATAGTTAGTTCTATGGGTATCCTTGTTTGCCTGATCACCACTTTATTTGCAACTGATTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAGCCAGCATTGAAGAAGCAACTCATAATTTCCACTGTTCTAATGACCTTTGGAATTGCAATTGTTACTTGGTTGGCTGTTCCATCGAAATTTACCATCTTCAATTTTGGAACTCAAAAAGTTGTACAGAACTGGGAACTTTTCTTGTGCGTTGCTGTTGGTCTTTGGGCTGGGCTTATAATAGGATTTGTGACAGAGTATTACACTAGCAATGCATACAGCCCCGTGCAAGATGTTGCTGATTCTTGCCGAACTGGAGCTGCTACAAATGTTATTTTTGGCTTGGCCTTGGGATACAAATCTGTCATTATCCCTATTTTTGCAATTGCAGTTAGCATTTTTGTGAGTTTCTCCTTTGCTGCAATGTATGGCATAGCCGTTGCTGCCCTTGGAATGTTGAGTACAATTGCTACTGGTTTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGCATTGCAGAGATGGCTGGCATGAGCCACAGAATTCGGGAGAGAACCGATGCCCTCGATGCTGCTGGAAACACAACTGCAGCCATTGGAAAGGGTTTTGCCATTGGCTCAGCTGCTCTTGTGTCCCTTGCCCTCTTCGGTGCCTTTGTCAGCCGTGCTGGTGTCAGTGTTGTTGACGTCTTGACACCCAAAGTTTTCATTGGCTTGATCGTGGGTGCTATGTTGCCCTACTGGTTTTCTGCCATGACAATGAAGAGTGTTGGGAGTGCAGCCCTAAAGATGGTTGAGGAGGTGCGAAGGCAATTTAACACCATCCCAGGTCTCATGGAGGGTACCGCCAAGCCCGACTATGCTACATGTGTCAAGATCTCAACTGATGCTTCTATCAAGGAGATGATCCCACCAGGTGCCCTTGTCATGTTGACACCCCTAATTGTTGGTATCCTATTTGGAGTCGAAACTCTTTCTGGCGTTCTTGCTGGATCCCTTGTTTCTGGTGTGCAGATTGCTATCTCTGCATCCAACACCGGAGGTGCCTGGGACAATGCTAAGAAGTACATCGAGGCTGGTGCCTCTGAGCATGCAAGAACCCTTGGCCCGAAAGGATCAGATCCACACAAAGCCGCTGTTATCGGTGACACAATCGGAGACCCACTCAAGGATACATCGGGACCTTCCCTCAACATTCTTATCAAGTTGATGGCTGTTGAGTCCCTTGTGTTTGCTCCTTTCTTCGCCAGCCACGGTGGTATTCTCTTCAAGATCTTCTAA 2307 45.86 MGVTILPDLGAQIFIPLCALVGILFSLVQWYYVSQVKLSSSRDSSNNNSAAAKNGYSDYLIEEEEGVNDHNVVIKCAEIQNAISEGATSFLFTEYYYVGIFMVLFAVLIFVFLGSVEGFSTKPQACSYDKTKTCKPALATAIFSTVSFILGAVTSVVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGEDWGGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGNNHEFTPMLYPLIVSSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTFGIAIVTWLAVPSKFTIFNFGTQKVVQNWELFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVSVVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFASHGGILFKIF 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24517065 24521421 + CaPI482276_06g013020.1 Cam06g1302 129602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1302 768 PIRSF H+-PPtase 12 766 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cam06g1302 768 NCBIfam V-type H(+)-translocating pyrophosphatase 12 763 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cam06g1302 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 766 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cam06g1302 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cam06g1302 768 Pfam Inorganic H+ pyrophosphatase 74 753 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1564 Cam-Chr2:28559586 Cam06g1302 Cam-Chr6:24517065 0.00E+00 dispersed
Cam06g1302 Cam-Chr6:24517065 Cam09g0174 Cam-Chr9:2499997 3.30E-116 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1302 K23025 - csv:101222673 1443.33