Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1341 ATGGCATTTGATCAGAACGCAATTCCCACAGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGATCCCCATTTAACCCCGGTCGCTTCTACTGGTCGAAACCCGCAAAGGTTTACCCCCCAGCATCCCTGCGACGTTGCCAGTGCAGACACTGTGCCCGTTCCTGGTAAGGGGAACGTCTCTGATATAGGATTTGTTGAGCTAGGATATCGAAATGTGGTTGCTGGTGTTACTGCATGGTGCCCTCGAATGCCTCCTCCCTTTACACATACTGCAACAATTCCTGCCGTAGGGTTTGGTTACTGCTCTGATCTGAATGTCATGGGCAATCGTGGTGGTGCCAATGCTGTTGAGCTTGCTAGCAGTTGCATGACAGTTGGGATTAATCATAGTACAAATTCGAGTCATCGATTTGGGGGAGGTGGCTTGGAATTTGTGAGCAATAATATCTCAATGGGGTCTGGAGATAGTGCCAATTTATGCAATAAGGTAACTGCCAATGGTGATCAGATTAATAGTGATAGTACTTCTGGTTTTAGCTCCCACTTGAGGAATTCGGTTGATGGGAGTGCGGTTGATCAAGTGAGCGAGGAGGGTGGAGATGGTTCCATTTCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTTGGTGGCAAGATTTTTCCTAGACCAAGTGATGGGATGTTGAGATACATTGGAGGCCAAACAAGGATTATAAGTGTTAGGAGAGACGTGACTTTCAATGAGCTTGTACGAAAGATGGTTGATACCTGTGGGCAGGCTGTGGTTATAAAGTATCAGCTCCCCGACGAGGATCTTGATGCTTTAATATCTGTTTCATGCCCTGATGATCTTGATAATATGATGGATGAGTATGAGAAGCTGGTTGAGAGATCTTCAGAAGGATCGGCTAAATTGAGGATGTTTCTGTTCTCTGCTTCAGAACTTGACTCTTCAGGTATGGTGCAATTTGGCGATTTGCACGATAGTGGGCAGAGATATGTTGAAACAGTGAATGGGATGTTTGATGGCGTTGGTGGCCGTATTACAAGGAAAGAGAGCTTTGCAAGTGCTACCTCAACTCAAAATTCTGACTTAAGTGGGACGGAGGCGATGGATATCGCAAATAATGATCTAGGGGGGGTTGTGAGTGGGCCTCCATCCACAACACTGTCCTTACCTGGAGGAAATTTAGGTACTGCAGTTGCTATTGGCCCTGGATTAGTGAAAGTAGATCCTGTCTCTGCAGTTTTTGTAGACGCCTCAGCTGTTCCATCAAGTATTCCCGTGCTTAACTCTGTTCCTCCTGAAGCTTCTTCGCAGCCTGAGGTGGAGTTAGGAAGGTCTGTGCCTGTTACTCTAATGCAGCAGCAACCAGGTATTGACTTTCCTCCACCTGTGTCTCAATTGCAGCCTACTGGTGATTCTCGGCAAGCAGCATGTGTGGACTTTGTACAATTTCGTCCACAACTTGGCTTTTCAAACTCCCATCATTTAGGGGCATCTGGGTCTATGTTTATACAACAGCCAAATACTCTTGGAATTACCCCCAATCAGTTTGTCCCTGCAGTTCACATGACGATGGCTCCCTCTTCTTCTCACCTCAGTACTATGCCAAATACCTATCAATCGTTGGTTCAATATCCACGATCCCAGATGGATTATTTTTCCAACGCAAGCACATTTGGTCCAAGGTTTGTCCAGCTATCTGCAGAACAAGGCTACAACTCACGCCAGGTTCCAGCTCCTCCAGTATCAGTAGGGGTTGGGTTTGGTTTACATCAGGTACCACAGTCTGATCAGACAGTTACGTCTGATGAATTGGTATCCCATCATCGGGCAACTTTTTCTGAGAAGATCGAGAGGTTGGATGGCTGTTACTTCTGCCAGAAAGCAGTGCCACATGCTCATTCCAATTCTCCGTTGCAGGATCAAAGAGAAAATTTGACGAACCCTGTATCTGATTCAAAGTTTTCGTATTACAGTCATCACCCTGAAGATCATTTAACAGCCCATCCAATGAAAAATATTACAGAAACTGGAGCTTTGAGGCAACAAACTACTGAACATGGTGTCGGAATGCAAACCAGGATCTTTAATCCCATGGATCCAGAAGTTGAAAAACCTTCAGTGGAAGCTATTAGCTTCCCACATCGTATTGAGGGTCAACATGAGAATGACAACACTCTTAAAGATCAGCATAATCTTGATCATGGTAGGATCTCAGCTCTGCAGGGTGCTCTTGGGAGGCAAGGTGATATTCGGTCACCCCATGTTGCTGTTGTAGAACAGATTTGTCAGTCTGGCGAAGTTGATACTCTCCAGCACCACTATGTAGCTGTAGAGAATCAGTTCCGTCCAAATTTAGTCCTGGATAAACACGATGTTTGCTTTGTAGGTGCTCCTATCCTTGCTTCAGAGTACAACACTCACGAAAATCCAAATGAGTACTCTAATAGTCATCATGGCATTATTCCAAACCAAAATGCCACCCACACTGGAATTTGTTACGACCATCTCAGACCAATTGTTGGAAATTTGGAAAGTTCAAGTATATGCCCAACTGATATTTGTGCTAATTTGGATCACTGCAAATCACCCATTGAGAGAACTAGGAAGGAGGACAATTTTGGCAGCTGTTCACAACCAGTCTCAGAGAGGGAAGTTCTACTAGATAACAACTTTGTAAAGCCAATGGTGGTTCTCGACCCAAATAACGTAAAGCCAACTACTTTTGCTTGCTCTTCATCAGAGGTTCCCTATTTGATGAATGAACGACCTGTTGAGTCCAGTGAAGTGGCACAACCTCCTGTCAGGGGCTCTCCCGGAACATTACCACAAGCTGAAAATGGGATGCAACATTTAGAATCCAATGAAGTCTGTCATAGCAGAAATCCCCACTTATTTGACATGAAGACTGAACATATAAACAATGGAGTCCCTGATTCTGCTGAGTGGAAGGAGGACACTTCTCTATTGGAAACTAGGATGGTATCTGGTGATGTTGAATCCGTTTCTTTGCCTATCAGGACTGGAAATATGCAGGACACTGCAAATTCACTCTTCAGTAATCAGGATCCTTGGAACTTGCAGCATGATGCTCATTTTTTGCCGCCTAGACCAACTAAAATTCAACCGAGGAATGAAGCCCTTGCCTCCAGGGAACCCTTGACAGAGAGTCCTTTCAGGAATATTGGTGAACCAAATGTGGAAACAATTCTGGATGATGGAGTATGTCACCCATTGGTTAACTCAAACAAGGGTTCTTCAGAGGAACAAATTAGGAAAGATCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTTCAGTCGGCTCAATCCTCCAGCTCTGAATTGCATGAAAGAATTGATCCAGTTTGTGAGACTATCACCGAAGGAGATGTTCAAAATAATGATGATGGCAGGACAAGACATTCAGAAAAACCAAACCTTGGTTTTCCAATGTCAGAAGGCTTTGGCCGCTTGCAGGTAATAAAGAATAGTGACCTTGAAGAACTAAGAGAATTAGGTTCTGGCACTTTTGGCACTGTTTATCATGGAAAATGGAGGGGGACTGATGTTGCTATCAAACGAGTCAATGATAGGTGTTTTGCCGGGAAACCATCTGAACAAGATCGCATGAGAGAGGACTTTTGGAATGAAGCAATTAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTATGGTGTTGTGCTTGATGGCCCTGGGGGCTCTGTGGCAACAGTAACAGAATATATGGTTAATGGCTCGCTCAGAAATGCTTTGTTGAAGAATGAAAGGAGTCTTGACAAGCGTAAGCGTCTCTTGATTGCTATGGATGCAGCTTTTGGAATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTGAAAAGTGATAATCTGCTGGTCAACCTTCGTGATCCTCATCGCCCAATATGCAAGGTTGGTGACTTGGGCCTATCGAAGGTGAAACGCCAGACATTGATATCAGGTGGTGTGCGGGGAACACTTCCATGGATGGCACCCGAGCTTTTGAATGGGAGCAGCAATATGGTGTCCGAGAAGGTTGATGTGTTCTCCTTTGGTATTGTCTTGTGGGAGCTCCTCACTGGTGAAGAGCCCTACGCAAATTTGCATTATGGGATTATCATAGGTGGCATAGTAAGCAACACGTTGCGACCTGAAGTTCCAGAATCTTGTGATCCAGAATGGAGGTCACTGATGGAGAGATGCTGGTCATCTGAGCCGTCAGAGAGGCCAAGCTTCACTGAAATTGCACATGAATTGCGGTCCATGGCTACTAAGGCATATTGCTTCGCTGATGGCCCTTTCCTCTTCGCCTATGTTCCAGAATTGCGAAATACAAATGGGATTTGCACATACTTTCCCTCGACGTCATCATCTTTAGACGCATTCAAAGCCAAAACAGAGGAGAATGAGAATGGAACGAAGAACCCATTTTCCCAATCCAAACCCTCCATTTCTGCGTTATTTCGAATCTCCTTTATATCATTTCATCTCTCTTCCATGGCTTCCACAAACCACATAATTCAACAATCTTCTCCATTCCCAAAATCCCACTCTACTTAA 4608 44.53 MAFDQNAIPTGLRPLNVARTLVEDPHLTPVASTGRNPQRFTPQHPCDVASADTVPVPGKGNVSDIGFVELGYRNVVAGVTAWCPRMPPPFTHTATIPAVGFGYCSDLNVMGNRGGANAVELASSCMTVGINHSTNSSHRFGGGGLEFVSNNISMGSGDSANLCNKVTANGDQINSDSTSGFSSHLRNSVDGSAVDQVSEEGGDGSISKKKVKFMCSFGGKIFPRPSDGMLRYIGGQTRIISVRRDVTFNELVRKMVDTCGQAVVIKYQLPDEDLDALISVSCPDDLDNMMDEYEKLVERSSEGSAKLRMFLFSASELDSSGMVQFGDLHDSGQRYVETVNGMFDGVGGRITRKESFASATSTQNSDLSGTEAMDIANNDLGGVVSGPPSTTLSLPGGNLGTAVAIGPGLVKVDPVSAVFVDASAVPSSIPVLNSVPPEASSQPEVELGRSVPVTLMQQQPGIDFPPPVSQLQPTGDSRQAACVDFVQFRPQLGFSNSHHLGASGSMFIQQPNTLGITPNQFVPAVHMTMAPSSSHLSTMPNTYQSLVQYPRSQMDYFSNASTFGPRFVQLSAEQGYNSRQVPAPPVSVGVGFGLHQVPQSDQTVTSDELVSHHRATFSEKIERLDGCYFCQKAVPHAHSNSPLQDQRENLTNPVSDSKFSYYSHHPEDHLTAHPMKNITETGALRQQTTEHGVGMQTRIFNPMDPEVEKPSVEAISFPHRIEGQHENDNTLKDQHNLDHGRISALQGALGRQGDIRSPHVAVVEQICQSGEVDTLQHHYVAVENQFRPNLVLDKHDVCFVGAPILASEYNTHENPNEYSNSHHGIIPNQNATHTGICYDHLRPIVGNLESSSICPTDICANLDHCKSPIERTRKEDNFGSCSQPVSEREVLLDNNFVKPMVVLDPNNVKPTTFACSSSEVPYLMNERPVESSEVAQPPVRGSPGTLPQAENGMQHLESNEVCHSRNPHLFDMKTEHINNGVPDSAEWKEDTSLLETRMVSGDVESVSLPIRTGNMQDTANSLFSNQDPWNLQHDAHFLPPRPTKIQPRNEALASREPLTESPFRNIGEPNVETILDDGVCHPLVNSNKGSSEEQIRKDLQAVAEGVAASVLQSAQSSSSELHERIDPVCETITEGDVQNNDDGRTRHSEKPNLGFPMSEGFGRLQVIKNSDLEELRELGSGTFGTVYHGKWRGTDVAIKRVNDRCFAGKPSEQDRMREDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALLKNERSLDKRKRLLIAMDAAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNMVSEKVDVFSFGIVLWELLTGEEPYANLHYGIIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSEPSERPSFTEIAHELRSMATKAYCFADGPFLFAYVPELRNTNGICTYFPSTSSSLDAFKAKTEENENGTKNPFSQSKPSISALFRISFISFHLSSMASTNHIIQQSSPFPKSHST 1535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 24828014 24838523 + CaPI482276_06g013410.1 Cam06g1341 129641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1341 1535 CDD STKc_MAP3K-like 1178 1435 - -
Cam06g1341 1535 PRINTS Tyrosine kinase catalytic domain signature 1254 1267 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1341 1535 PRINTS Tyrosine kinase catalytic domain signature 1406 1428 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1341 1535 PRINTS Tyrosine kinase catalytic domain signature 1291 1309 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1341 1535 PRINTS Tyrosine kinase catalytic domain signature 1362 1384 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1341 1535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1297 1309 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1341 1535 SUPERFAMILY CAD & PB1 domains 226 318 - -
Cam06g1341 1535 CDD PB1_UP2 214 312 - -
Cam06g1341 1535 Gene3D Transferase(Phosphotransferase) domain 1 1260 1446 - -
Cam06g1341 1535 Pfam PB1 domain 230 313 IPR000270 GO:0005515(InterPro)
Cam06g1341 1535 Gene3D Phosphorylase Kinase; domain 1 1165 1259 - -
Cam06g1341 1535 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1165 1259 - -
Cam06g1341 1535 Pfam Protein tyrosine and serine/threonine kinase 1174 1435 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1341 1535 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1260 1447 - -
Cam06g1341 1535 Gene3D - 232 314 - -
Cam06g1341 1535 SMART PB1_new 225 314 IPR000270 GO:0005515(InterPro)
Cam06g1341 1535 MobiDBLite consensus disorder prediction 1134 1155 - -
Cam06g1341 1535 ProSiteProfiles Protein kinase domain profile. 1172 1436 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1341 1535 ProSitePatterns Protein kinases ATP-binding region signature. 1178 1209 IPR017441 GO:0005524(InterPro)
Cam06g1341 1535 SUPERFAMILY Protein kinase-like (PK-like) 1163 1433 IPR011009 -
Cam06g1341 1535 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 230 314 - -
Cam06g1341 1535 SMART serkin_6 1172 1443 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1341 1535 PANTHER SERINE-THREONINE PROTEIN KINASE 172 1438 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1341 Cam-Chr6:24828014 Cam11g1283 Cam-Chr11:25366720 8.50E-140 dispersed
Cam06g1341 Cam-Chr6:24828014 Cam03g0428 Cam-Chr3:5292833 1.60E-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85267 PF07714 PK_Tyr_Ser-Thr 7.50E-60 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1341 - - - 0.0