Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1365 ATGGCGGAAAAGGACAGAGACGGTAATTCTGGTGTGCTCCATGGGAAGTATGAGTTAGGTCGGCTTCTAGGGCATGGAACTTTTGCGAAGGTTTACCATGCCCGGAACTTGCAGACTGGGACGAGCATGGCGATGAAGGTGGTTGGGAAGGAGAAGGTCATAAAAGTAGGGATGATGGAGCAGATCAAGAGGGAGATCTCTGTGATGAAGATGGTGAAGCATCCGAACATTGTTGAGCTTCATGAGGTTATGGCGAGCAAATCGAAGATCTATTTCGCTATGGAGCTTGTTCGAGGCGGAGAATTGTTCTCCAAAATTTCCAAAGGTCGATTGAGAGAAGATGTGGCTAGGGTTTACTTTCAGCAACTGATTTCCGCGATCGATTTCTGTCACAGTCGAGGAGTTTATCATCGGGACCTCAAACCGGAGAATCTTCTTCTCGACGACGACGGAAATCTTAAGGTAACTGATTTTGGACTCAGCGCATTTTCCGAGCACTTGAAACAGGATGGATTGTTACACACAACTTGTGGAACGCCGGCGTATGTTGCGCCAGAAGTTATCGGGAAGAAGGGATACAACGGCGCCAAAGCCGATCTGTGGTCATGTGGAGTCATCCTTTACGTTCTCCTCGCCGGATTTCTTCCATTCCAGGACGACAATATTGTATCCATGTACAGGAAGATTTACAGAGGAGACTTCAAGTGCCCGCCGTGGTTCTCATCGGAAGCCCGTCGACTAATCACCAAACTCCTGGATCCAAATCCGAGCACCAGAATTACAACTTCAAAGATCATGGAATCGTCCTGGTTCAAGAAATCTGTACCAAGGACTGTGGTGACGAAAGAGGAGCAAGAATTCAATGAGAGCAACGAGAAATTGAAGCAATCTGAAACATTGAACGCATTCCATATAATTTCTTTATCAGAAGGTTTCGATTTGTCGCCGTTGTTCGAGGAGAAGAAGAGGGAAGAGAAAGAGGAGCTGAGATTTGCGACGACGAGGCCAGCGAGCAGTGTGATATCGAAGCTGGAAGAGGTGGCGAAGGCAGGGAAATTCAGCGTCAAAAAGAGCGAATCGAGGGTCAGATTGCAGGGACAGGAATGCGGAAGAAAAGGGAAACTGGCGGTGGCGGCGGAGATCTTCGCGGTGACGCCATCGTTTCTGGTGGTGGAGGTGAAGAAAGATCACGGTGATACACTTGAATACAATCAGTTCTGCAGCAAAGAGCTCCGGCCGGCGCTGAAAGACATCGTGTGGACATCACCGACGGAGAACTCCATGCCGGCTTGA 1293 48.8 MAEKDRDGNSGVLHGKYELGRLLGHGTFAKVYHARNLQTGTSMAMKVVGKEKVIKVGMMEQIKREISVMKMVKHPNIVELHEVMASKSKIYFAMELVRGGELFSKISKGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDDDGNLKVTDFGLSAFSEHLKQDGLLHTTCGTPAYVAPEVIGKKGYNGAKADLWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPSTRITTSKIMESSWFKKSVPRTVVTKEEQEFNESNEKLKQSETLNAFHIISLSEGFDLSPLFEEKKREEKEELRFATTRPASSVISKLEEVAKAGKFSVKKSESRVRLQGQECGRKGKLAVAAEIFAVTPSFLVVEVKKDHGDTLEYNQFCSKELRPALKDIVWTSPTENSMPA 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25096449 25097741 - CaPI482276_06g013650.1 Cam06g1365 129665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1365 430 CDD CIPK_C 301 416 - -
Cam06g1365 430 SUPERFAMILY Protein kinase-like (PK-like) 13 287 IPR011009 -
Cam06g1365 430 Pfam NAF domain 298 357 IPR004041 GO:0007165(InterPro)
Cam06g1365 430 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1365 430 FunFam Non-specific serine/threonine protein kinase 7 299 - -
Cam06g1365 430 SMART serkin_6 17 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam06g1365 430 Gene3D Phosphorylase Kinase; domain 1 14 98 - -
Cam06g1365 430 CDD STKc_SnRK3 16 270 - -
Cam06g1365 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam06g1365 430 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 415 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cam06g1365 430 FunFam Non-specific serine/threonine protein kinase 9 96 - -
Cam06g1365 430 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524(InterPro)
Cam06g1365 430 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165(InterPro)
Cam06g1365 430 Gene3D Kinase associated domain 1, KA1 295 421 - -
Cam06g1365 430 FunFam Non-specific serine/threonine protein kinase 295 420 - -
Cam06g1365 430 Coils Coil 280 300 - -
Cam06g1365 430 Gene3D Transferase(Phosphotransferase) domain 1 99 277 - -
Cam06g1365 430 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0652 Cam-Chr4:20620852 Cam06g1365 Cam-Chr6:25096449 2.80E-117 dispersed
Cam04g0654 Cam-Chr4:20732385 Cam06g1365 Cam-Chr6:25096449 1.30E-147 dispersed
Cam05g0542 Cam-Chr5:4774604 Cam06g1365 Cam-Chr6:25096449 1.60E-92 dispersed
Cam06g0414 Cam-Chr6:6243259 Cam06g1365 Cam-Chr6:25096449 9.40E-105 dispersed
Cam06g0661 Cam-Chr6:8896762 Cam06g1365 Cam-Chr6:25096449 2.40E-100 dispersed
Cam06g1220 Cam-Chr6:23449650 Cam06g1365 Cam-Chr6:25096449 3.10E-111 dispersed
Cam06g1365 Cam-Chr6:25096449 Cam10g1383 Cam-Chr10:27409550 5.70E-134 dispersed
Cam02g1762 Cam-Chr2:30733102 Cam06g1365 Cam-Chr6:25096449 6.20E-213 transposed
Cam06g1557 Cam-Chr6:27047409 Cam06g1365 Cam-Chr6:25096449 3.00E-20 transposed
Cam05g1800 Cam-Chr5:26800703 Cam06g1365 Cam-Chr6:25096449 9.30E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85268 PF00069 Pkinase 1.50E-73 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1365 - - - 0.0