Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1369 ATGGCGTTGTTGCGCAAATTGTTCTTCCGGAAGCCGCCCGATGGCCTTCTTGAGATCTGTGAAAGAGTCTATGTTTTTGATTGCTGTTTTACCACGGATACTTGGAAGGAAGAGAATTATGAAGTTTACTTAGGTGGAATAGTTGCTCAACTCCGAGAACATTTAGCAGATGCATCGTTCTTGGTATTCAATTTTAGGAGATTAGAGTTGCAAAGTCAGATGGGTGATATCTTATCTAAGTATGATATGACCATAATGGACTACCCTCAGCAGTACGAGGGTTGCCCAGTTCTGACGATGGAAGTGGTTCACCATTTTCTAAGATCATGTGAGAGTTGGCTTTCCCTTGGGCAGAATAATGTTTTGCTAATGCATTGTGAACGTGGTGGTTGGCCAGTTTTAGCTTTCATGCTTTCGGCTCTCTTGATTTATAGGAAACAATATAGTGGGGAACAAAGGACATTGGACATGGTTTATCGACAGGCACCTCGTGAGCTTTTGCAGTTCTTGTCTCCTATGAATCCAGTTCCTTCTCAATTAAGGTATCTGCAATATGTTGCAAGGAGGAATGTAGCCTTAGAATGGCCACCTATGGACAGAGCTCTCACTTTGGATTGTATCATTTTGAGATTTATTCCAAATTTTGATGGAGAGGGTGGTTGCCGTCCAATATTTCGAATATATGGACAAGATCCTCTACTTGTCAGTGATCGAACTCCTAAAGTTCTGTATTCAACTCCTAAAAGAAGCAAAAATATCCGTACTTACAAACAGGCAGAATCAGAACTGGTTAAGATTGATGTTAATTGCCATATTCAAGGTGATGTTGTGCTTGAGTGCATCACCTTGGATGATGACATGGACTTTGAAGAGATGATGTTCAGAGCAATGTTTAATACTGCTTTTATTCGCTCTAATATTTTAATTCTCAACCGTGAAGAGATCGACACTTTGTGGAACGCTAAAGATAAATTTCCAAAGGACTTTCGAGCAGAGATTCTCTTCTCTGAGATGGATGCTGGAACTTGTACTGTCGCAAACGATATACTTTGCATTGAGGAGGAAGGTCTCCCCATCGAAGCATTTGCTAAAGTGCAAGAAATCTTTAGTCATGTGGATTGGTTAGATCCCAAAGCAGATGTTGCCCTTAATGTGCTTCATCAGATGAATGCCTTAAACATAGCCCAAGAAAAGTCAGACCATAATTCTCTTTGGAGTACACAAGTTAGTCCTTTACTTCAGTGTACAAGTCCTAGAAAACTTCCACAGAAATTCACATTGGAGAACAAAATTAAAAGCGTAGAGAAGGAAGAATCTACTCCAACATCTAAATTTTCTCCGGATGCTGCTAAAACTGAACAGAACTATGAATCTGATTCAGTATTCCAGCAGGTGCCTCAATCTTCAGAGTCTTTTCCACTTACCTATGACATTTTACAAGATTCGCCAAATTCAGAGAGAAGCGATAGGACCTCATATAGTGCTTCGGTTGGAAGCCACTCATTTATTGATTCTGATGGAGAAATAGATGTTTCTCATCTGAAAACTGCATCTTCATCTTTCCCGAATGCAGCAATGGCTTCTTCTCTTGCACCTGAATCTCTTCAGAATAAAAGTTTCTACACAGAAACAACCATACCATCACCTCCTCCTCTCCCCCAACTTTCCACAGATATTTCTGCTGCAAATTCTCTAGCTCCTTCTCCCCGTACTCCAACTGCATCGCCACTTTCGTCTAGTAACTTTTCAACTCTAAGACCAGATAGATCTTCCCTCACCGAGGAAATAGAAATCTATTCAAAGGATCAAAATCAGTTATCAACCATTGACCCTCCCCTGTCCGTAACCTCTGCAGTTAGTTCCTCAACACAGCCTCCTCCACCACCTCCTCCACCACCTCCTTCGACACCTCCTTTGAACAATACCATAGCAGTTAGAGTTAAAGCTTCTCCGCCAACACCCCCTCCTTTTCCTTCAACATTTGCTTCCCATCCTACAATTGCATCCTTAGTGCCTCAACCACCACCACCTCCTCCTCCTCCCACATCCACTGTAAATCGTAAAATTTCATCTCCAATCCCTTCACCTCCACCACCTCCTCCTCCTCCTCCAATGGCCCTTGTAGATCCTAAGATTTCCTCTCCAGTCCCTCCACCACCACCACCTCTTCCTATGATGTCCAAACAGGTTGAAAGTACTTCAACATCTCCATTTGTTCCTCCACCACCACCACCTCTTCCTATGACATCCAGGCAGGTTGGAAGTACTTCAACATCTTCTTCTGTTCCTCCACCGCCACCACCTCTTCCGTCTAGACAGGGAAGTACTTCAACATCTCCATCTGTCCCCCCTCCTCCACCGCCACCTGCTTCTACCACAAGCTCCTCTTCACCTGTTCCTTCTGCTCCCCCTCCTCCTACCCTTTCTGGGAGAGGGACTTCAAAATTGGGTGAGCTGTGTCCTGGTTCTCTTCTTGGAAATGGTTCGTCTAGGTCTTCCTCTCCTGTGCCACCAAGTAGTTCTCCATCAGCTATAAAGGGACGGAGTTTGTCACGCACTATAAGTTCAAGAACACATATAACCAAGAAACTGAAGCCATTGCATTGGTTAAAGTTATCTAAAGCAGTGCAAGGAAGCTTATGGGCTGAAGCTCAAAAAACTGGTGAAGCTGCCAGGGCACCGGAGATTGACATGTCAGAGCTTGAAAGTCTTTTCTCAGCGGCAGTTCCTGCTCCTGATCAGCACAAGAAGTCGGGTGGACGTGGTTCAGTTGGCAATAAACCTGAGAAAGTACAACTGATTGATCACAGGCGAGCTTATAATTGTGAAATCATGCTTTCAAAGGTCAAGGTGCCTTTGCAGGATTTAATGAGTTCTGTGCTTGACCTTGAAGATTCAGCTTTGGATATCGATCAGGTTGAGAATCTTATTAAGTTTTGTCCGACAAAGGAGGAAATGGATTTACTTAAGGGGTACACCGGAGAAAAGGAGAAGCTTGGAAAATGTGAACAGTTCTTCTTGGAGTTGATGCAAGTACCTCGTGTTGAATCTAAACTTCGAGTCTTCTCATTCAAGATACAGTTCACCTCTCAGGTCGCAGACCTCAAGAAAAGCTTGAATTTTGTTAACTCTGCTGCAGAAGAGATAAAAAGTTCAGTGAAGTTGAAGAGAATCATGCAGACAATACTATCTCTAGGAAATGCTTTAAACCAAGGAACAGCAAGGGGCTCTGCGATAGGATTTAGGCTGGACAGCCTTCTCAAACTGACAGAAACTCGTGCACGAAACAACAAGATGACTCTAATGCATTATCTTTGCAAGATACTTGCTGACAAACTGCCAGAGGTTCTGGATTTTTCTAAAGATCTTGCAAGCTTGGAGCCTGCATCAAAGGTACAATTGAAGGTTTTGGCAGAGGAAATGCAAGCAATTAGCAAAGGGTTGGAGAAAGTTGTTCAAGAATTGTCTACATCTGAAAATGATGGCCCTATATCCAATAATTTCCGAACGGTTTTAAAGGAGTTCCTCCGTTTTGCTGAAGCTGAAGTGAGAACTTTGGCTTCACTGTACTCTAGCGTGGGTAGAAATGTAGATTCTTTGATTCTTTATTTTGGAGAAGATCCAGCTCGCTGCCCCTTTGAACAAGTTATGTCAACCTTATGCAACTTTGTGAGAATGTTTAACCGAGCTCACGAGGAAAACTGCAAGCAGATTGAGCTTGAAATGAAGAAAGCAACAGAAAGCGAAAAATCAAAGACTGGGCACTTGCACAAGAGGACGAGGACGAGACAGTTATCACACTCCCAGATCGAGATTAGCAATGTCAATTACAACATACTAATTGGCATCCTTATGTGCACTGCAGCAACACTGGCAGCAAAATAA 3885 42.99 MALLRKLFFRKPPDGLLEICERVYVFDCCFTTDTWKEENYEVYLGGIVAQLREHLADASFLVFNFRRLELQSQMGDILSKYDMTIMDYPQQYEGCPVLTMEVVHHFLRSCESWLSLGQNNVLLMHCERGGWPVLAFMLSALLIYRKQYSGEQRTLDMVYRQAPRELLQFLSPMNPVPSQLRYLQYVARRNVALEWPPMDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPLLVSDRTPKVLYSTPKRSKNIRTYKQAESELVKIDVNCHIQGDVVLECITLDDDMDFEEMMFRAMFNTAFIRSNILILNREEIDTLWNAKDKFPKDFRAEILFSEMDAGTCTVANDILCIEEEGLPIEAFAKVQEIFSHVDWLDPKADVALNVLHQMNALNIAQEKSDHNSLWSTQVSPLLQCTSPRKLPQKFTLENKIKSVEKEESTPTSKFSPDAAKTEQNYESDSVFQQVPQSSESFPLTYDILQDSPNSERSDRTSYSASVGSHSFIDSDGEIDVSHLKTASSSFPNAAMASSLAPESLQNKSFYTETTIPSPPPLPQLSTDISAANSLAPSPRTPTASPLSSSNFSTLRPDRSSLTEEIEIYSKDQNQLSTIDPPLSVTSAVSSSTQPPPPPPPPPPSTPPLNNTIAVRVKASPPTPPPFPSTFASHPTIASLVPQPPPPPPPPTSTVNRKISSPIPSPPPPPPPPPMALVDPKISSPVPPPPPPLPMMSKQVESTSTSPFVPPPPPPLPMTSRQVGSTSTSSSVPPPPPPLPSRQGSTSTSPSVPPPPPPPASTTSSSSPVPSAPPPPTLSGRGTSKLGELCPGSLLGNGSSRSSSPVPPSSSPSAIKGRSLSRTISSRTHITKKLKPLHWLKLSKAVQGSLWAEAQKTGEAARAPEIDMSELESLFSAAVPAPDQHKKSGGRGSVGNKPEKVQLIDHRRAYNCEIMLSKVKVPLQDLMSSVLDLEDSALDIDQVENLIKFCPTKEEMDLLKGYTGEKEKLGKCEQFFLELMQVPRVESKLRVFSFKIQFTSQVADLKKSLNFVNSAAEEIKSSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKILADKLPEVLDFSKDLASLEPASKVQLKVLAEEMQAISKGLEKVVQELSTSENDGPISNNFRTVLKEFLRFAEAEVRTLASLYSSVGRNVDSLILYFGEDPARCPFEQVMSTLCNFVRMFNRAHEENCKQIELEMKKATESEKSKTGHLHKRTRTRQLSHSQIEISNVNYNILIGILMCTAATLAAK 1294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25159876 25170572 - CaPI482276_06g013690.1 Cam06g1369 129669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1369 1294 SMART PTEN_C2_2 197 337 IPR014020 -
Cam06g1369 1294 Pfam C2 domain of PTEN tumour-suppressor protein 198 337 IPR014020 -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 669 726 - -
Cam06g1369 1294 Pfam Formin Homology 2 Domain 861 1228 IPR015425 -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 478 499 - -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 760 807 - -
Cam06g1369 1294 Gene3D Protein tyrosine phosphatase superfamily 15 199 IPR029021 -
Cam06g1369 1294 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 186 IPR029021 -
Cam06g1369 1294 Gene3D Formin, FH2 domain 853 1238 IPR042201 -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 443 464 - -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 597 621 - -
Cam06g1369 1294 Gene3D - 200 340 - -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 432 464 - -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 622 639 - -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 825 857 - -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 541 857 - -
Cam06g1369 1294 MobiDBLite consensus disorder prediction 555 589 - -
Cam06g1369 1294 PRINTS Proline rich extensin signature 685 710 - -
Cam06g1369 1294 PRINTS Proline rich extensin signature 664 681 - -
Cam06g1369 1294 PRINTS Proline rich extensin signature 541 553 - -
Cam06g1369 1294 PRINTS Proline rich extensin signature 645 661 - -
Cam06g1369 1294 PRINTS Proline rich extensin signature 621 642 - -
Cam06g1369 1294 PANTHER FORMIN-J 1 1252 IPR051144 -
Cam06g1369 1294 Coils Coil 1228 1248 - -
Cam06g1369 1294 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Cam06g1369 1294 SUPERFAMILY Formin homology 2 domain (FH2 domain) 763 1244 - -
Cam06g1369 1294 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Cam06g1369 1294 ProSiteProfiles Formin homology-2 (FH2) domain profile. 854 1253 IPR015425 -
Cam06g1369 1294 SMART it6_source 854 1292 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1369 Cam-Chr6:25159876 Cam07g0233 Cam-Chr7:3459027 1.70E-253 dispersed
Cam05g1798 Cam-Chr5:26764496 Cam06g1369 Cam-Chr6:25159876 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1369 K28090 - csv:101221713 1984.92