Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam06g1467 ATGGCAACCCTCCAAATTCGTGACATCGAAACCGAAATCTCTGTGGAGTTTCTGGTAGATCGAATCATCGACCTTCACAAAAGCATCTCGGAGCTTGAAACCCTAAAGCCATGCAAGAAAGTGAACCTCCTCTTCACCAACCTAGTGAACTTGTGCATTTTGCCTTGCTCAATGGATGTCTCAACATTGCCACCAAATGTACAAGCCATTCGTGAGAGCCTCATAGTTCTATGTGGCCAAGCTGAAAGCTTACTCGAGTTAGAATTCTCAACTTTGCTAAGCAAAATCCCCAAACCTCTCAACAATCTCACTCTATTTCCATATTACCACAACTACGTCAAATTAGCCAACCTTGAAAACAAGATTTTGAAAGACAATGGAGTTGTCAATCCAAAGAAGGTAGCTTTTGTTGGGTCAGGTCCTTTGCCTCTAACTTCAATTATTATGGCCATGAAACACATGAAGGGCACGTATTTCGATAACTATGATGTAGACAGCGTGGCGAATAACGTGGCGGGAAAGATCGTGGGATCGGACGCTGAGCTGGAGGGAAGAATGAAGTTTTGGACGAGGGATATTGTTGAGGTAAAAGAAGAGCTTGGAGGATATGATTGTGTGTTTTTGGCGGCTCTTGTGGGGATGAAGAAGGAAGATAAAGTGAAGATTATAAAGCATTTAAGAAAGTATATGAAAGAAGGTGGGATTGTGGTAGTGAGAAGTGCTAAAGGAGGTAGAGCATTTTTGTACCCTGTGGTTGAAGTTGGAGATTTGGTTGGCTTTGAGATTCTCTCTATTTTTCATCCCACTGATGATGTTGTTAATTCGGTTATCTTAGTTCGCAAGCCTGTGATTATATGA 858 41.96 MATLQIRDIETEISVEFLVDRIIDLHKSISELETLKPCKKVNLLFTNLVNLCILPCSMDVSTLPPNVQAIRESLIVLCGQAESLLELEFSTLLSKIPKPLNNLTLFPYYHNYVKLANLENKILKDNGVVNPKKVAFVGSGPLPLTSIIMAMKHMKGTYFDNYDVDSVANNVAGKIVGSDAELEGRMKFWTRDIVEVKEELGGYDCVFLAALVGMKKEDKVKIIKHLRKYMKEGGIVVVRSAKGGRAFLYPVVEVGDLVGFEILSIFHPTDDVVNSVILVRKPVII 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26088140 26088997 - CaPI482276_06g014670.1 Cam06g1467 129767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam06g1467 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 277 IPR029063 -
Cam06g1467 285 PANTHER NICOTIANAMINE SYNTHASE 3 12 282 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cam06g1467 285 Gene3D Vaccinia Virus protein VP39 14 282 IPR029063 -
Cam06g1467 285 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cam06g1467 285 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 285 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1553 Cam-Chr2:28488469 Cam06g1467 Cam-Chr6:26088140 1.60E-67 dispersed
Cam06g1467 Cam-Chr6:26088140 Cam03g1780 Cam-Chr3:32916765 2.10E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam06g1467 K05953 - csv:101209464 480.33